 |
Job Description | Q46864 | Confidence | 91.55% | Date | Thu Jan 5 12:35:21 GMT 2012 |
Rank | 83 | Aligned Residues | 51 |
% Identity | 25% | Template | c1au7B_ |
PDB info |
PDB header:transcription/dna | Chain: B: PDB Molecule:protein pit-1; |
PDBTitle: pit-1 mutant/dna complex
|
Resolution | 2.30 Å |
|
  |   |
71 | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | |
|
|
|
|
|
. | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
| . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | E | F | I | V | K | V | R | K | K | L | S | L | T | Q | K | E | A | S | E | I | F | G | . |
. |
. |
. |
. |
. |
G | G | V | N | A | F | S | R | Y | E | K | G | N | A | Q | P | H | P | S | T | I | K | L | L | R | V | L | D | K |
Query Conservation |   |
  |   |   |
|
|   |
|
|   |   |   |
|
|
|
|   |   |
|
|   |   |
|
| . | . | . | . | . | . |   |   |   |   |
|
|
|
|   |
|   |
|   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|   |
|
|
|   |
|
|   |
|
|   |   |
|
|   |
|
|   |   |   |   |
|   |   |   |
|
|
|   |
|   |
|
|
|   |
| . |   |
|
|   |
|
|   |   |   |
|
|
|   |
|   |   |
Template Sequence |   |
A | N | E | F | K | V | R | R | I | K | L | G | Y | T | Q | T | N | V | G | E | A | L | A | A | V | H | G | S | E | F | S | Q | T | T | I | C | R | F | E | N | L | . |
Q | L | S | F | K | N | A | C | K | L | K | A | I | L | S | K |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  | G | G | G | T | S | S | S |
|
|
|  |  |  |  |  |  |  |  |  | T | . |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
13 | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | |
. | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|