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43 | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | |
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. | . | 110 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  | . | . | . |  |  |  |
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Query SS confidence |   |
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| . |
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Query Sequence |   |
D | S | L | T | Y | R | V | E | T | D | S | A | T | D | A | L | F | T | G | H | R | R | Y | F | E | V | H | Y | Y | L | Q | G | Q | Q | K | I | E | Y | A | P | K | E | T | L | Q | V | V | E | Y | Y | R | D | E | T | D | R | E | Y | L | K | G | C | G | E | T | . |
. |
. |
V | E | V | H | E | G | Q | I | V | I | C | D |
Query Conservation |   |
|   |
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|   |
|   |   |   |   |   |   |   |   |
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|   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |
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|   |   |   |   |   |   |   | . | . | . |
|   |
|   |   |
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Alig confidence |   |
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| . | . |
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| . | . | . |
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Template Conservation |   |
  |
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|   |   |   |   |   |
|   |   |
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|   |
|   |
|   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |
|   |
|   |
|   |
|   |   |
|   |   |   |
| . | . |   |   |   |   |   |   |
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|   |
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|   |   |   |   |   |
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Template Sequence |   |
K | R | V | Y | Y | I | F | D | T | K | G | E | E | P | R | G | F | H | A | H | K | K | L | E | Q | V | L | V | C | L | N | G | S | C | R | V | I | L | D | D | G | N | I | I | Q | E | I | T | L | . |
. |
D | S | P | A | V | G | L | Y | V | G | P | A | V | W | H | E | M | H | D | F | S | S | D | C | V | M | M | V | L |
Template Known Secondary structure |   |
|  |  |  |  |  |
| S |
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| S | S |
|
|  |  |  |  |  |  | S | S |
|
|  |  |  |  |  |  |  | S |
|  |  |  |  |  |  |
| S | S |
|  |  |  |  |  |  | . | . |
|
| T | T |  |  |  |  |  |
| T | T |
|  |  |  |  |  |
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| T | T |
|  |  |  |  |  |
Template Predicted Secondary structure |   |
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|  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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| . | . |
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|  |  |  |  |  |  |  |
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|  |  |  |  |  |  |
Template SS confidence |   |
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  |   |
32 | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | |
|
. | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . |
  |
  |   |
120 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |
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Query SS confidence |   |
|
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Query Sequence |   |
I | H | E | A | Y | R | F |
Query Conservation |   |
|   |
|   |
|   |
|
Alig confidence |   |
|
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|
|
|
Template Conservation |   |
|
|   |   |
|
|
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Template Sequence |   |
A | S | D | Y | Y | D | E |
Template Known Secondary structure |   |
 | S | S |
|
|
| G |
Template Predicted Secondary structure |   |
|
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Template SS confidence |   |
|
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  |   |
110 | . | . | . | . | . | . |
  |