|   |
25 | . | . | . | . | 30 | . | |
|
|
. | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
| . | . | . |
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |
|
|
|
|  |  |
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | A | I | E | N | I | D | . |
. |
. |
N | I | Q | P | G | V | A | H | S | I | G | D | S | L | T | Y | R | V | E | T | D | S | A | T | D | A | L | F | T | G | H | R | R | Y | F | E | V | H | Y | Y | L | Q | G | Q | Q | K | I | E | Y | A | P | K | E | T | L | Q | V | V | E | Y | Y | R | D | E | T | D | R | E | Y | L |
Query Conservation |   |
  |
|
|   |   |   |
| . | . | . |   |
|   |   |
|   |   |   |
|   |
|
|   |
|
|   |   |
|   |
|   |   |   |   |   |   |   |   |
|   |
|
|   |
|
|
|
|
|   |   |
|   |
|   |
|   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |
|   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
  |
|
|   |   |
|   |   |   |
|   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|
|
|   |
|   |
|   |
|   |
|
| . |   |
|
|   |
|
|
|
|
|
|   |
|   |
|   |
|   |
|   |   |   |   |
|   |   |   |
| . | . | . | . | . | . | . | . | . | . |
Template Sequence |   |
K | W | L | K | E | N | E | G | L | L | K | P | P | V | N | N | Y | C | L | H | K | G | G | F | T | V | M | I | V | G | G | P | N | E | R | T | D | Y | H | I | N | P | . |
T | P | E | W | F | Y | Q | K | K | G | S | M | L | L | K | V | V | D | E | T | D | A | E | P | K | F | I | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Template Known Secondary structure |   |
 |  |  |  |  |  | G | G | G | G | S | S | S | S |
|  |  |  |  |  |
| S | S |  |  |  |  |  |  |
| S | S | B |
|
| S |
|  |  |  |
| S | . | S |
|  |  |  |  |  |  |  | S |
|  |  |  |  |  |  |  |
| S | S | S | S |
|  |  |  | . | . | . | . | . | . | . | . | . | . |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  | . | . | . | . | . | . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
11 | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | |
. | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
  |
  |   |
102 | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | G | C | G | E | T | V | E | V | H | E | G | Q | I | V | I | C | D | I | H | E | A | Y | R | F | I | C | N | N | A | V | K | K | V | V | L |
Query Conservation |   |
  |   |   |   |   |   |
|   |
|   |   |
|   |
|   |
|
|
|
|   |
|   |
|   |
|   |   |   |   |   |
|
|
|   |
|   |
Alig confidence |   |
. | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . | . | . |   |
|   |
|   |
|
|
|   |
|
|
|
|   |
|
|   |
|   |
|
|
|   |   |
|
|   |
|
|
|
|
Template Sequence |   |
. |
. |
. |
. |
. |
D | I | I | I | N | E | G | D | S | Y | L | L | P | G | N | V | P | H | S | P | V | R | F | A | D | T | V | G | I | V | V |
Template Known Secondary structure |   |
. | . | . | . | . |  |  |  |  |
| T | T |
|  |  |  |  |
| T | T |
|
|  |  |  |  |  |
| T | T |
|  |  |  |  |  |
Template Predicted Secondary structure |   |
. | . | . | . | . |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
|
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 |
  |