|   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | D | A | N | I | R | V | A | I | A | G | A | G | G | R | M | G | R | Q | L | I | Q | A | A | L | A | L | E | G | V | Q | L | G | A | A | L | E | R | E | G | S | S | L | L | G | S | D | A | G | E | L | A | G | A | G | K | T | G | V | T | V | Q | S | S | L | D | A | V | K | D | D | F | D | V | F | I | D | F | T | R |
Query Conservation |   |
|   |   |   |
|
|
|
|
|
|
|   |   |
|   |
|
|   |   |
|   |   |   |
|   |   |   |   |   |   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|
|
|
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |
|
|
|   |
|   |
|   |   |
|
|
|
|   |   |
|   |   |   |
|   |   |   |   |   |   |
|
|
|   |   |
|   |   |   |   |   |   |   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |
|
|
|
|
|
|
|   |
Template Sequence |   |
H | D | A | N | I | R | V | A | I | A | G | A | G | G | R | M | G | R | Q | L | I | Q | A | A | L | A | L | E | G | V | Q | L | G | A | A | L | E | R | E | G | S | S | L | L | G | S | D | A | G | E | L | A | G | A | G | K | T | G | V | T | V | Q | S | S | L | D | A | V | K | D | D | F | D | V | F | I | D | F | T | R |
Template Known Secondary structure |   |
|
|
| B |  |  |  |  |  | T | T | T | T | S |  |  |  |  |  |  |  |  |  |  |  |  | S | T | T |  |  |
|
|
|  |  |
|
| T | T |
| T | T |
| S |
|
| T | T |
| S | S | S | S | S |
|
| S |
|
|  |  | S |
| S | T | T | T | T | T | S |
| S |  |  |  |  |
| S |
|
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
  |
  |   |
82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | |
|
. | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | E | G | T | L | N | H | L | A | F | C | R | Q | H | G | K | G | M | V | I | G | T | T | G | F | D | E | A | G | K | Q | A | I | R | D | A | A | A | D | I | A | I | V | F | A | A | N | F | S | V | G | V | N | . |
. |
V | M | L | K | L | L | E | K | A | A | K | V | M | G | D | Y | T | D | I | E | I | I | E | A | H |
Query Conservation |   |
|   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |
|
|
|
|
|
|
|   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |
|
|   |
|   |
|
|
|   |
|
|   | . | . |
|
|   |   |   |   |   |   |
|
|   |   |
|   |   |   |   |
|   |
|
|   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|
|
|
|
|   |   |   |
|   |   |   |   |
|   |   |   |
|   |   |   |   |
|
|   |
|   |
|
|
|
|
|
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
|
|
|
|   |
|   |
|
Template Sequence |   |
P | E | G | T | L | N | H | L | A | F | C | R | Q | H | G | K | G | M | V | I | G | T | T | G | F | D | E | A | G | K | Q | A | I | R | D | A | A | A | D | I | A | I | V | F | A | A | N | F | S | M | T | F | A | N | G | A | V | R | S | A | L | W | L | S | G | K | E | S | G | L | F | D | M | R | D | V | L | D | L | N |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  | T | T | T | S |
|  |  |  |
| S |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| S | S |  |  |
|  |  |  |  | T | T | G | G |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . |
  |
  |   |
160 |
Predicted Secondary structure |   |
|
Query SS confidence |   |
|
Query Sequence |   |
H |
Query Conservation |   |
|
Alig confidence |   |
|
Template Conservation |   |
|
Template Sequence |   |
N |
Template Known Secondary structure |   |
G |
Template Predicted Secondary structure |   |
|
Template SS confidence |   |
|
  |   |
272 |
  |