Job Description P04036 Confidence 97.53% Date Thu Jan 5 10:58:10 GMT 2012 Rank 281 Aligned Residues 128 % Identity 17% Template c5mdhB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:malate dehydrogenase; PDBTitle: crystal structure of ternary complex of porcine cytoplasmic malate2 dehydrogenase alpha-ketomalonate and tnad at 2.4 angstroms resolution Resolution 2.40 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.						.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.					.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.																	.	.	.	.
Query SS confidence																										.	.	.	.	.																	.	.	.	.
Query Sequence		A	N	I	R	V	A	I	A	G	A	G	G	R	M	G	R	Q	L	I	Q	A	A	L	A	.	.	.	.	.	L	E	G	V	Q	L	G	A	A	L	E	R	E	G	S	S	.	.	.	.	L	L	G	S	D	A	G	E	L	A	G	A	G	K	T	G	V	T	V	Q	S	S	L	D	A	V	K	D	D	F	D
Query Conservation																										.	.	.	.	.																	.	.	.	.
Alig confidence																										.	.	.	.	.																	.	.	.	.
Template Conservation
Template Sequence		E	P	I	R	V	L	V	T	G	A	A	G	Q	I	A	Y	S	L	L	Y	S	I	G	N	G	S	V	F	G	K	D	Q	P	I	I	L	V	L	L	D	I	T	P	M	M	G	V	L	D	G	V	L	M	E	L	Q	D	C	A	L	P	L	L	K	D	V	I	A	T	D	K	E	E	I	A	F	K	D	L	D
Template Known Secondary structure										S	T	T	S	T											T	T	T	T	T		T	T											G	G	G														T			T	T								S						T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		75	.	.	.	.										80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.																																												.
Query SS confidence							.	.	.	.	.	.	.	.	.																																												.
Query Sequence		V	F	I	D	F	.	.	.	.	.	.	.	.	.	T	R	P	E	G	T	L	N	H	L	A	F	C	R	Q	H	G	K	G	M	V	I	G	T	T	G	F	D	E	A	G	K	Q	A	I	R	D	A	A	A	D	I	A	.	I	V	F	A	A	N	F	S	V	G	V	N	V	M	L	K	L	L	E	K	A	A
Query Conservation							.	.	.	.	.	.	.	.	.																																												.
Alig confidence							.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.								.	.	.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.
Template Sequence		V	A	I	L	V	G	S	M	P	R	R	D	G	M	E	R	K	D	L	L	K	A	N	V	K	I	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	C	Q	G	A	A	L	D	K	Y	A	K	K	S	V	K	V	I	V	V	G	N	P	.	.	.	A	N	T	N	C	L	T	A	S	K	S	A
Template Known Secondary structure								S					S	S	S		S		T	T									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											S		T	T							S	S	S	.	.	.											T
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.																.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.				.	.	.	.	.	.	.	.	140	.	.	.
		145	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	M	G	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	S	I	P	K
Template Known Secondary structure		T	T	S		G
Template Predicted Secondary structure
Template SS confidence
		144	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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