Job Description P04036 Confidence 96.69% Date Thu Jan 5 10:58:10 GMT 2012 Rank 371 Aligned Residues 167 % Identity 17% Template c3tl2A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:malate dehydrogenase; PDBTitle: crystal structure of bacillus anthracis str. ames malate dehydrogenase2 in closed conformation. Resolution 1.70 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.				.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.																	.
Query SS confidence																																							.	.	.																	.
Query Sequence		M	H	D	A	N	I	R	V	A	I	A	G	A	G	G	R	M	G	R	Q	L	I	Q	A	A	L	A	L	E	G	V	Q	L	G	A	A	L	.	.	.	E	R	E	G	S	S	L	L	G	S	D	A	G	E	L	A	.	G	A	G	K	T	G	V	T	V	Q	S	S	L	D	A	V	K	D	D	F	D	V	F
Query Conservation																																							.	.	.																	.
Alig confidence															.																								.	.	.																	.
Template Conservation															.
Template Sequence		M	T	I	K	R	K	K	V	S	V	I	G	A	.	G	F	T	G	A	T	T	A	F	L	L	A	Q	K	E	L	A	D	V	V	L	V	D	I	P	Q	L	E	N	P	T	K	G	K	A	L	D	M	L	E	A	S	P	V	Q	G	F	D	A	N	I	I	G	T	S	D	Y	A	D	T	A	D	S	D	V	V
Template Known Secondary structure															.	S													T	T										G	G	G																			T									S		G	G	G	G	T	T		S
Template Predicted Secondary structure															.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.		.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		77	.	.	80		.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure						.
Query SS confidence						.
Query Sequence		I	D	F	T	.	R	P	E	G	T	L	N	H	L	A	F	C	R	Q	H	G	K	G	M	V	I	G	T	T	G	F	D	E	A	G	K	Q	A	I	R	D	A	A	A	D	I	A	I	V	F	A	A	N	F	S	V	G	V	N	V	M	L	K	L	L	E	K	A	A	K	V	M	G	D	Y	T	D	I	E	I
Query Conservation						.
Alig confidence						.																					.	.	.	.	.	.	.																							.	.	.															.	.	.	.
Template Conservation																											.	.	.	.	.	.	.																							.	.	.															.	.	.	.
Template Sequence		V	I	T	A	G	I	A	R	K	P	G	M	S	R	D	D	L	V	A	T	N	S	K	I	M	.	.	.	.	.	.	.	K	S	I	T	R	D	I	A	K	H	S	P	N	A	I	I	V	V	L	T	N	P	.	.	.	V	D	A	M	T	Y	S	V	F	K	E	A	G	F	.	.	.	.	P	K	E	R	V
Template Known Secondary structure						S					T	T															.	.	.	.	.	.	.												T	T								S	S	.	.	.															.	.	.	.		G	G	G
Template Predicted Secondary structure																											.	.	.	.	.	.	.																							.	.	.															.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.								.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.				.	.	.	130	.	.	.	.	.	.	.	.	.	140					.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.				.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure																		.	.	.
Query SS confidence																		.	.	.
Query Sequence		I	E	A	H	H	R	H	K	V	D	A	P	S	G	T	A	.	.	.	L	A	M	G	E	A	I	A	H	A	L	D	K	D	L	K	D	C	A	V	Y
Query Conservation																		.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.				.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.
Template Sequence		I	G	Q	.	.	.	.	.	.	.	.	.	.	S	G	V	L	D	T	A	R	F	R	T	F	I	A	Q	E	L	N	L	S	V	K	D	I	T	G	F
Template Known Secondary structure					.	.	.	.	.	.	.	.	.	.																		T			G	G	G
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.
Template SS confidence
		146	.	.											.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions