Job Description P04036 Confidence 97.59% Date Thu Jan 5 10:58:10 GMT 2012 Rank 269 Aligned Residues 126 % Identity 16% Template c3pqeD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:l-lactate dehydrogenase; PDBTitle: crystal structure of l-lactate dehydrogenase from bacillus subtilis2 with h171c mutation Resolution 2.20 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.			.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																.	.
Query SS confidence																																																.	.
Query Sequence		H	D	A	N	I	R	V	A	I	A	G	A	G	G	R	M	G	R	Q	L	I	Q	A	A	L	A	L	E	G	V	Q	L	G	A	A	L	E	R	E	G	S	S	L	L	G	S	.	.	D	A	G	E	L	A	G	A	G	K	T	G	V	T	V	Q	S	S	L	D	A	V	K	D	D	F	D	V	F	I	D	F
Query Conservation																																																.	.
Alig confidence														.																																		.	.
Template Conservation														.
Template Sequence		N	K	H	V	N	K	V	A	L	I	G	A	.	G	F	V	G	S	S	Y	A	F	A	L	I	N	Q	G	I	T	D	E	L	V	V	I	D	V	N	K	E	K	A	M	G	D	V	M	D	L	N	H	G	K	A	F	A	P	Q	P	V	K	T	S	Y	G	T	Y	E	D	C	K	D	A	D	I	V	C	I	C
Template Known Secondary structure														.	S														T			S							S	S														T	G	G	G	S	S	S									G	G	G	G	T	T		S
Template Predicted Secondary structure														.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.		.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		80	.	.				.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure					.	.	.
Query SS confidence					.	.	.
Query Sequence		T	R	P	.	.	.	E	G	T	L	N	H	L	A	F	C	R	Q	H	G	K	G	M	V	I	G	T	T	G	F	D	E	A	G	K	Q	A	I	R	D	A	A	A	D	I	A	I	V	F	A	A	N	F	S	V	G	V	N	V	M	L	K	L	L	E	K	A	A	K	V
Query Conservation					.	.	.
Alig confidence					.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.
Template Sequence		A	G	A	N	R	L	E	L	V	E	K	N	L	K	I	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	G	I	V	S	E	V	M	A	S	G	F	D	G	I	F	L	V	A	T	N	P	.	.	.	V	D	I	L	T	Y	A	T	W	K	F	S	G	L
Template Known Secondary structure			S				T	T										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									T	T	T			S						S	S	S	.	.	.
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.																.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.				.	120	.	.	.	.	.	.	.	.	.	130	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions