Return to main results Retrieve Phyre Job Id

Job DescriptionP04036
Confidence100.00%DateThu Jan 5 10:58:10 GMT 2012
Rank2Aligned Residues266
% Identity42%Templatec3ijpA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:dihydrodipicolinate reductase; PDBTitle: crystal structure of dihydrodipicolinate reductase from2 bartonella henselae at 2.0a resolution
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40.........50.........60.........70.........80....
Predicted Secondary structure 




























Query SS confidence 















































































Query Sequence  NIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFDVFIDFTRPEG
Query Conservation   






  
 

  
   
      



                              
       




 
 
  
Alig confidence 















































































Template Conservation 



 
 

 



  
   
    
 


  
          
           
 
  

       






 
  
Template Sequence  SMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVDKDASILIGSDFLGVRITDDPESAFSNTEGILDFSQPQA
Template Known Secondary structure 
SSTTST
SSB

TT
TTTTSBGGGGTT
S

S
B
BS
TTS
S
S
Template Predicted Secondary structure 









































Template SS confidence 















































































   0.........10.........20.........30.........40.........50.........60.........70.........
 
   85....90.........100.........110.........120.........130.........140.........150.........160....
Predicted Secondary structure 




























Query SS confidence 















































































Query Sequence  TLNHLAFCRQHGKGMVIGTTGFDEAGKQAIRDAAADIAIVFAANFSVGVNVMLKLLEKAAKVMGDYTDIEIIEAHHRHKV
Query Conservation         

  
  






        
   
    

 
 


 

 

      

  
    
 

 
 

  
 
Alig confidence 















































































Template Conservation             
  






        
   
   


 
 


 

 

  
   

  
    



 
 

  
 
Template Sequence  SVLYANYAAQKSLIHIIGTTGFSKTEEAQIADFAKYTTIVKSGNMSLGVNLLANLVKRAAKALDDDFDIEIYEMHHANKV
Template Known Secondary structure  T






TTS
S


S
TTS
TT

Template Predicted Secondary structure 



























Template SS confidence 















































































   80.........90.........100.........110.........120.........130.........140.........150.........
 
   165....170.........180.........190.........200.........210.........220.........230.........240....
Predicted Secondary structure 






































Query SS confidence 















































































Query Sequence  DAPSGTALAMGEAIAHALDKDLKDCAVYSREGHTGERVPGTIGFATVRAGDIVGEHTAMFADIGERLEITHKASSRMTFA
Query Conservation 






  
   
                      
    
 
 
 
 
   
 
 
 
    
 
 
 
 
  
  

Alig confidence 















































































Template Conservation 






  
   
                           
 


 
 
 
 
 
 
 
    
 
 
 
 
  
  

Template Sequence  DSPSGTALLLGQAAAEGRNIMLKNVSVNGRSGHTGKREKGTIGFACSRGGTVIGDHSITFAGENERIVLSHIAQERSIFA
Template Known Secondary structure 
SS
TTS

GGG

S


TT

TT

TT

T
Template Predicted Secondary structure 








































Template SS confidence 















































































   160.........170.........180.........190.........200.........210.........220.........230.........
 
   245....250.........260.........270
Predicted Secondary structure 









Query SS confidence 

























Query Sequence  NGAVRSALWLSGKESGLFDMRDVLDL
Query Conservation   


 

  
     
 
 
 


 
Alig confidence 

























Template Conservation   


 

  
     
 
 
 


 
Template Sequence  NGALKAALWAKNHENGLYSMLDVLGL
Template Known Secondary structure  TT

S


Template Predicted Secondary structure 







Template SS confidence 

























   240.........250.........260.....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions