Job Description P04036 Confidence 98.16% Date Thu Jan 5 10:58:10 GMT 2012 Rank 200 Aligned Residues 121 % Identity 14% Template c3gg2B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:sugar dehydrogenase, udp-glucose/gdp-mannose PDBTitle: crystal structure of udp-glucose 6-dehydrogenase from2 porphyromonas gingivalis bound to product udp-glucuronate Resolution 1.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.													.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	R	V	A	I	A	G	A	G	G	R	M	G	R	Q	L	I	Q	A	A	L	A	L	E	G	V	Q	L	G	A	A	L	E	R	E	G	S	S	L	L	G	S	D	A	G	E	L	A	G	A	G	.	.	.	.	.	.	.	.	.	.	.	.	K	T	G	V	T	V	Q	S	S	L	D	A	V	K	D	D	F
Query Conservation																																																					.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.																	.	.																									.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.																	.	.
Template Sequence		L	D	I	A	V	V	G	I	.	G	Y	V	G	L	V	S	A	T	C	F	A	E	L	G	A	.	.	N	V	R	C	I	D	T	D	R	N	K	I	E	Q	L	N	S	G	T	I	P	I	Y	E	P	G	L	E	K	M	I	A	R	N	V	K	A	G	R	L	R	F	G	T	E	I	E	Q	A	V	P	E	A
Template Known Secondary structure										.	S													T	T		.	.							S										T	T			S	S			T	T											T	T	S					S						G	G	G
Template Predicted Secondary structure										.																	.	.
Template SS confidence
		79	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.			.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		74	.	.	.	.	.	80	.	.														.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.				.	.	.	.	.	110	.	.	.	.	.	.	.	.							.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.															.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.															.	.	.	.	.	.
Query Sequence		D	V	F	I	D	F	T	R	P	.	.	.	.	.	.	.	.	.	.	.	.	.	E	G	T	L	N	H	L	A	F	C	R	Q	H	G	K	G	M	V	I	G	T	T	.	.	.	G	F	D	E	A	G	K	Q	A	I	R	D	A	A	.	.	.	.	.	.	A	D	I	A	I	V	F	A	A	N	F
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.															.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.															.	.	.	.	.	.
Template Conservation
Template Sequence		D	I	I	F	I	A	V	G	T	P	A	G	E	D	G	S	A	D	M	S	Y	V	L	D	A	A	R	S	I	G	R	A	M	S	R	Y	I	L	I	V	T	K	S	T	V	P	V	G	S	Y	R	L	I	R	K	A	I	Q	E	E	L	D	K	R	E	V	L	I	D	F	D	I	A	S	N	P	E	F
Template Known Secondary structure		S										B		T	T	S	S	B																		S								S				T	T																T	T
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions