 |
Job Description | P04036 | Confidence | 96.97% | Date | Thu Jan 5 10:58:10 GMT 2012 |
Rank | 350 | Aligned Residues | 94 |
% Identity | 17% | Template | c3egoB_ |
PDB info |
PDB header:oxidoreductase | Chain: B: PDB Molecule:probable 2-dehydropantoate 2-reductase; |
PDBTitle: crystal structure of probable 2-dehydropantoate 2-reductase2 pane from bacillus subtilis
|
Resolution | 1.90 Å |
|
 |
  |   |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | R | V | A | I | A | G | A | G | G | R | M | G | R | Q | L | I | Q | A | A | L | A | L | E | G | V | Q | L | G | A | A | L | E | R | E | G | S | S | L | L | G | S | D | A | G | E | L | A | G | A | G | K | T | G | V | T | V | Q | S | S | L | D | A | V | K | D | D | F | D | V | F | I | D | F | T | R | P | E | G | T |
Query Conservation |   |
|
|
|
|
|
|
|   |   |
|   |
|
|   |   |
|   |   |   |
|   |   |   |   |   |   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|
|
|
|   |
|   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |
|
|
|   | . |
|   |   |
|   |   |   |
|   |   |
|   |   |
|   |   |
|   |   |   | . |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|   |
|   |   |   |   |   |
Template Sequence |   |
L | K | I | G | I | I | G | G | . |
G | S | V | G | L | L | C | A | Y | Y | L | S | L | Y | H | D | V | T | V | V | . |
T | R | R | Q | E | Q | A | A | A | I | Q | S | E | G | I | R | L | Y | K | G | G | E | E | F | R | A | D | C | S | A | D | T | S | I | N | S | D | F | D | L | L | V | V | T | V | K | Q | H | Q | L |
Template Known Secondary structure |   |
|  |  |  |  |  |
|
| . | S |  |  |  |  |  |  |  |  |  |  | T | T | T | S |  |  |  |  |  | . |
| S |
|  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  | T | T |  |  |  |  |  |
|
|  |  |  | S | S |
|
| S |
|
| S |  |  |  |  |
|
|
| G | G | G |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |
|
| . |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  | . |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | . | . | |
. | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | |
. | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . |
  |
  |   |
86 | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | N | H | L | A | F | C | R | Q | H | G | K | G | M | V | I |
Query Conservation |   |
  |   |   |   |   |   |
|
|   |   |
|   |   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |
|   |   |   |   |   |   |   |   |
|
Template Sequence |   |
Q | S | V | F | S | S | L | E | R | I | G | K | T | N | I | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | T | S |
| S |
|  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
79 | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|