Return to main results Retrieve Phyre Job Id

Job DescriptionP04036
Confidence99.59%DateThu Jan 5 10:58:10 GMT 2012
Rank58Aligned Residues154
% Identity16%Templatec3btuD_
PDB info PDB header:transcriptionChain: D: PDB Molecule:galactose/lactose metabolism regulatory protein PDBTitle: crystal structure of the super-repressor mutant of gal80p2 from saccharomyces cerevisiae; gal80(s2) [e351k]
Resolution2.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10... ......20....... ..30.........40.........50.........60.........70.........
Predicted Secondary structure 



...

.





















Query SS confidence 









. . .













.



















































Query Sequence  ANIRVAIAGA. . . GGRMGRQLIQAALA. LEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFDVFIDF
Query Conservation    






 ... 
 

  
   
  .    



                              
       




 
Alig confidence 









...













.








































..








Template Conservation   







 
   
     
  
        




 
     
              
    


  ..  

 
 
 
Template Sequence  APIRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETSIATIQRLKLSNATAFPTLESFASS. . STIDMIVIA
Template Known Secondary structure 

S

SSSSSGGGTTTTT
SSTT
TT

SS
..SS
S
Template Predicted Secondary structure 


























..



Template SS confidence 















































































   16...20.........30.........40.........50.........60.........70.........80.... .....90...
 
   80.........90...... ...100. ........110.........120.........130.........140...... ...150
Predicted Secondary structure 



......

.











..



Query SS confidence 
















. . . . . .




.












































. .



Query Sequence  TRPEGTLNHLAFCRQHG. . . . . . KGMVI. GTTGFDEAGKQAIRDAAADIAIVFAANFSVGVNVMLKLLEKAAKV. . MGDY
Query Conservation 
 
         

  
......  


.



        
   
    

 
 


 

 

      

  ..
   
Alig confidence 
















......




.












































..



Template Conservation 

   
      

 

      



 




 
  

  
   
   
    
    
  
     
 

  
 

 
Template Sequence  IQVASHYEVVMPLLEFSKNNPNLKYLFVEWALACSLDQAESIYKAAAERGVQTIISLQGRKSPYILRAKELISQGYIGDI
Template Known Secondary structure  S
GGGGGG
TT


SS

SST


GGGG
TTTT
S
Template Predicted Secondary structure 


































Template SS confidence 















































































   94.....100.........110.........120.........130.........140.........150.........160.........170...
 
   151........
Predicted Secondary structure 



Query SS confidence 








Query Sequence  TDIEIIEAH
Query Conservation   
 

 
 
Alig confidence 








Template Conservation    
      
Template Sequence  NSIEIAGNG
Template Known Secondary structure 
Template Predicted Secondary structure 

Template SS confidence 








   174.....180..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions