|   |
4 | . | . | . | . | . | 10 | . | . | . | |
|
|
. | . | . | . | . | . | 20 | . | . | . | . | . | . | . | |
. | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
| . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  | . |
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|  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |
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|
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|
|
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|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
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|
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|
| . |
. |
. |
|
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| . |
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Query Sequence |   |
A | N | I | R | V | A | I | A | G | A | . |
. |
. |
G | G | R | M | G | R | Q | L | I | Q | A | A | L | A | . |
L | E | G | V | Q | L | G | A | A | L | E | R | E | G | S | S | L | L | G | S | D | A | G | E | L | A | G | A | G | K | T | G | V | T | V | Q | S | S | L | D | A | V | K | D | D | F | D | V | F | I | D | F |
Query Conservation |   |
  |   |
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|   | . | . | . |   |
|   |
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|   |   |
|   |   |   |
|   |   | . |   |   |   |   |
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|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
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|   |
Alig confidence |   |
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|
| . | . | . |
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| . |
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| . | . |
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Template Conservation |   |
  |
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|   |
|   |   |   |
|   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |
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|
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|   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|
|
|   |   | . | . |   |   |
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|   |
|   |
|   |
Template Sequence |   |
A | P | I | R | V | G | F | V | G | L | N | A | A | K | G | W | A | I | K | T | H | Y | P | A | I | L | Q | L | S | S | Q | F | Q | I | T | A | L | Y | S | P | K | I | E | T | S | I | A | T | I | Q | R | L | K | L | S | N | A | T | A | F | P | T | L | E | S | F | A | S | S | . |
. |
S | T | I | D | M | I | V | I | A |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  | S |
|
| S | S | S | S | S | G | G | G | T |  |  |  |  |  |  |  | T | T | T | T |  |  |  |  |  |  |  |
| S | S |  |  |  |  |  |  |  |  |  |  | T | T |
| T | T |
|  |  |
| S | S |  |  |  |  |  |  |
| . | . | S | S |
| S |  |  |  |  |
|
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |
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|  |  |  |  |  |
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| . | . |
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|  |  |  |  |  |
Template SS confidence |   |
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  |   |
16 | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | |
|
. | . | . | . | . | 90 | . | . | . |
  |
  |   |
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | |
|
|
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|
|
. | . | . | 100 | . | |
. | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | |
|
. | . | . | 150 |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . | . |
|
|  |  |  | . |  |
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|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |
|
|
|
|
Query SS confidence |   |
|
|
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|
|
| . |
. |
. |
. |
. |
. |
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| . |
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| . |
. |
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|
Query Sequence |   |
T | R | P | E | G | T | L | N | H | L | A | F | C | R | Q | H | G | . |
. |
. |
. |
. |
. |
K | G | M | V | I | . |
G | T | T | G | F | D | E | A | G | K | Q | A | I | R | D | A | A | A | D | I | A | I | V | F | A | A | N | F | S | V | G | V | N | V | M | L | K | L | L | E | K | A | A | K | V | . |
. |
M | G | D | Y |
Query Conservation |   |
|   |
|   |   |   |   |   |   |   |   |   |
|
|   |   |
| . | . | . | . | . | . |   |   |
|
|
| . |
|
|
|
|   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |
|
|   |
|   |
|
|
|   |
|
|   |
|
|   |   |   |   |   |   |
|
|   |   | . | . |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
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|
|
|
|
|
|
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|
|
| . | . | . | . | . | . |
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| . |
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|
|
| . | . |
|
|
|
|
Template Conservation |   |
|
|   |   |   |
|   |   |   |   |   |   |
|
|   |
|
|   |   |   |   |   |   |
|
|
|
|   |
|
|
|
|
|   |
|   |   |
|
|   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |
|   |   |   |   |
|   |   |
|   |   |   |   |   |
|   |
|
|   |   |
|   |
|
|   |
|
Template Sequence |   |
I | Q | V | A | S | H | Y | E | V | V | M | P | L | L | E | F | S | K | N | N | P | N | L | K | Y | L | F | V | E | W | A | L | A | C | S | L | D | Q | A | E | S | I | Y | K | A | A | A | E | R | G | V | Q | T | I | I | S | L | Q | G | R | K | S | P | Y | I | L | R | A | K | E | L | I | S | Q | G | Y | I | G | D | I |
Template Known Secondary structure |   |
S |
| G | G | G |  |  |  |  |  |  |  |  |  |  |  | G | G | G |
| T | T |
|
|  |  |  |  |
| S | S |
|
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |  |
|
| G | G | G | G |
|  |  |  |  |  |  |  |  |  |  |  | T | T | T | T |
| S |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
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|
|
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|
|
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|
|
|
|
|
|
  |   |
94 | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . |
  |
  |   |
151 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | D | I | E | I | I | E | A | H |
Query Conservation |   |
  |
|   |
|
|   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |   |   |   |
Template Sequence |   |
N | S | I | E | I | A | G | N | G |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
  |   |
174 | . | . | . | . | . | 180 | . | . |
  |