Job Description P04036 Confidence 100.00% Date Thu Jan 5 10:58:10 GMT 2012 Rank 6 Aligned Residues 247 % Identity 16% Template c3bioB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:oxidoreductase, gfo/idh/moca family; PDBTitle: crystal structure of oxidoreductase (gfo/idh/moca family member) from2 porphyromonas gingivalis w83 Resolution 1.80 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	N	I	R	V	A	I	A	G	A	G	G	R	M	G	R	Q	L	I	Q	A	A	L	A	L	E	G	V	Q	L	G	A	A	L	E	R	E	G	S	S	L	L	G	S	D	A	G	E	L	A	G	A	G	K	T	G	V	T	V	Q	S	S	L	D	A	V	K	D	D	F	D	V	F	I	D	F	T	R	P	E
Query Conservation
Alig confidence												.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Template Conservation												.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Template Sequence		K	K	I	R	A	A	I	V	G	Y	.	G	N	I	G	R	Y	A	L	Q	A	L	R	E	A	P	D	F	E	I	A	G	I	V	R	R	N	P	A	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	F	R	V	V	S	D	I	E	Q	L	.	.	E	S	V	D	V	A	L	V	C	S	P	S	R
Template Known Secondary structure												.	S														T	T									S	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.		S				S	S	G	G	G	S	.	.	S	S								S
Template Predicted Secondary structure												.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.															.	.	.	.	.	.	50	.	.	.	.			.	.	.	.	.	60	.	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.			.	110	.	.	.	.	.	.	.	.	.	120			.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.				150	.	.	.	.	.	.
Predicted Secondary structure																											.	.													.	.																														.	.	.
Query SS confidence																											.	.													.	.																														.	.	.
Query Sequence		G	T	L	N	H	L	A	F	C	R	Q	H	G	K	G	M	V	I	G	T	T	G	F	D	E	.	.	A	G	K	Q	A	I	R	D	A	A	A	D	.	.	I	A	I	V	F	A	A	N	F	S	V	G	V	N	V	M	L	K	L	L	E	K	A	A	K	V	M	G	D	.	.	.	Y	T	D	I	E	I	I
Query Conservation																											.	.													.	.																														.	.	.
Alig confidence																											.	.													.	.																														.	.	.
Template Conservation
Template Sequence		E	V	E	R	T	A	L	E	I	L	K	K	G	I	C	T	A	D	S	F	D	I	H	D	G	I	L	A	L	R	R	S	L	G	D	A	A	G	K	S	G	A	A	A	V	I	A	S	G	W	D	P	G	S	D	S	V	V	R	T	L	X	Q	A	I	V	P	K	G	I	T	Y	T	N	F	G	P	G	X	S
Template Known Secondary structure													T	T										G	G	G																T						S		B	B	T	T	B													S											S
Template Predicted Secondary structure
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.																				.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	A	H	H	R	H	K	V	D	A	P	S	G	T	A	L	A	M	G	E	A	I	A	H	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	K	D	L	K	D	C	A	V	Y	S	R	E	G	H	T	G	E	R	V	P	G	T	I	G	F	A	T	V	R	A	G	D	I	V
Query Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		X	G	H	T	V	A	V	K	A	I	D	G	V	K	A	A	L	S	X	T	I	P	L	G	T	G	V	H	R	R	X	V	Y	V	E	L	L	P	G	H	N	L	E	E	V	S	A	A	I	K	A	D	E	Y	F	V	H	D	E	T	H	V	I	Q	V	D	E	V	D	A	L	I	D	X	G	H	G	V	R	X
Template Known Secondary structure										T	S	T	T												S	T	T												T	T													S	T	T	T	T	T	S								S		G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	H	T	A	M	F	A	D	I	G	E	R	L	E	I	T	H	K	A	S	S	R	M	T	F	A	N	G	A	V	R	S	A	L	W	L	S	G	K	E	S	G	L	F	D	M	R	D	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	R	K	G	V	S	G	S	T	Q	N	Q	R	X	S	F	D	X	E	I	N	N	P	A	L	T	G	Q	V	L	V	C	A	A	R	A	A	X	R	Q	Q	P	G	A	Y	T	L	Q	E	I
Template Known Secondary structure								T	T																														T	T	S		S					G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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