Job Description P04036 Confidence 99.39% Date Thu Jan 5 10:58:10 GMT 2012 Rank 79 Aligned Residues 114 % Identity 19% Template c2yv1A_ PDB info PDB header:ligase Chain: A: PDB Molecule:succinyl-coa ligase [adp-forming] subunit alpha; PDBTitle: crystal structure of succinyl-coa synthetase alpha chain from2 methanocaldococcus jannaschii dsm 2661 Resolution 1.70 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.			.	.	.	.	.	.	.	80
Predicted Secondary structure																																																																								.	.
Query SS confidence																																																																								.	.
Query Sequence		D	A	N	I	R	V	A	I	A	G	A	G	G	R	M	G	R	Q	L	I	Q	A	A	L	A	L	E	G	V	Q	L	G	A	A	L	E	R	E	G	S	S	L	L	G	S	D	A	G	E	L	A	G	A	G	K	T	G	V	T	V	Q	S	S	L	D	A	V	K	D	D	.	.	F	D	V	F	I	D	F	T
Query Conservation																																																																								.	.
Alig confidence																												.														.	.	.	.	.	.	.	.	.	.	.																				.	.
Template Conservation																												.														.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	E	N	T	K	A	I	V	Q	G	I	T	G	R	Q	G	S	F	H	T	K	K	M	L	E	C	.	G	T	K	I	V	G	G	V	T	P	G	K	G	.	.	.	.	.	.	.	.	.	.	.	G	Q	N	V	H	G	V	P	V	F	D	T	V	K	E	A	V	K	E	T	D	A	N	A	S	V	I	F	V
Template Known Secondary structure			T	T							T	T	T	S													T	.	T									T	T		T	.	.	.	.	.	.	.	.	.	.	.	T				T	T					S	S
Template Predicted Secondary structure																												.														.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.												50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.		.	.	.	.	.
Predicted Secondary structure																				.																										.
Query SS confidence																				.																										.
Query Sequence		R	P	E	G	T	L	N	H	L	A	F	C	R	Q	H	G	K	G	.	M	V	I	G	T	T	G	F	D	E	A	G	K	Q	A	I	R	D	A	A	A	D	I	A	I	.	V	F	A	A	N
Query Conservation																				.																										.
Alig confidence																				.																										.
Template Conservation
Template Sequence		P	A	P	F	A	K	D	A	V	F	E	A	I	D	A	G	I	E	L	I	V	V	I	T	E	H	I	P	V	H	D	T	M	E	F	V	N	Y	A	E	D	V	G	V	K	I	I	G	P	N
Template Known Secondary structure																T	T		S							S																		T						S	S
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions