Job Description P04036 Confidence 98.95% Date Thu Jan 5 10:58:10 GMT 2012 Rank 104 Aligned Residues 116 % Identity 19% Template c2fpgA_ PDB info PDB header:ligase Chain: A: PDB Molecule:succinyl-coa ligase [gdp-forming] alpha-chain, PDBTitle: crystal structure of pig gtp-specific succinyl-coa2 synthetase in complex with gdp Resolution 2.96 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.			.	.	.	.	.	.
Predicted Secondary structure																																																																										.	.
Query SS confidence																																																																										.	.
Query Sequence		M	H	D	A	N	I	R	V	A	I	A	G	A	G	G	R	M	G	R	Q	L	I	Q	A	A	L	A	L	E	G	V	Q	L	G	A	A	L	E	R	E	G	S	S	L	L	G	S	D	A	G	E	L	A	G	A	G	K	T	G	V	T	V	Q	S	S	L	D	A	V	K	D	D	.	.	F	D	V	F	I	D
Query Conservation																																																																										.	.
Alig confidence																															.													.	.	.	.	.	.	.	.	.	.	.																				.	.
Template Conservation																															.													.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	V	D	K	N	T	K	V	I	C	Q	G	F	T	G	K	Q	G	T	F	H	S	Q	Q	A	L	E	Y	G	.	T	N	L	V	G	G	T	T	P	G	K	G	.	.	.	.	.	.	.	.	.	.	.	G	K	T	H	L	G	L	P	V	F	N	T	V	K	E	A	K	E	Q	T	G	A	T	A	S	V	I
Template Known Secondary structure					T	T							T	T	T	S														T	.									T	T		T	.	.	.	.	.	.	.	.	.	.	.	T				T	T					S												S
Template Predicted Secondary structure																															.													.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.												.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.
Predicted Secondary structure																						.													.													.
Query SS confidence																						.													.													.
Query Sequence		F	T	R	P	E	G	T	L	N	H	L	A	F	C	R	Q	H	G	K	G	.	M	V	I	G	T	T	G	F	D	E	A	G	.	K	Q	A	I	R	D	A	A	A	D	I	A	.	I	V	F	A	A	N
Query Conservation																						.													.													.
Alig confidence																						.													.													.
Template Conservation
Template Sequence		Y	V	P	P	P	F	A	A	A	A	I	N	E	A	I	D	A	E	V	P	L	V	V	C	I	T	E	G	I	P	Q	Q	D	M	V	R	V	K	H	R	L	L	R	Q	G	K	T	R	L	I	G	P	N
Template Known Secondary structure																		T	T		S							S																T		S	S						S	S
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions