Job Description P04036 Confidence 96.52% Date Thu Jan 5 10:58:10 GMT 2012 Rank 400 Aligned Residues 125 % Identity 14% Template c2fnzA_ PDB info
PDB header: oxidoreductaseChain: A: PDB Molecule: lactate dehydrogenase;
PDBTitle: crystal structure of the lactate dehydrogenase from cryptosporidium2 parvum complexed with cofactor (b-nicotinamide adenine dinucleotide)3 and inhibitor (oxamic acid)
Resolution 2.50 Å
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70 . . . . . . .
Predicted Secondary structure
. . .
Query SS confidence
.
.
.
Query Sequence
M H D A N I R V A I A G A G G R M G R Q L I Q A A L A L E G V Q L G A A L E R E G S S L L G .
.
S D A G E L A G A G K T G V T .
V Q S S L D A V K D D F D V F I
Query Conservation
. . .
Alig confidence
. . . . . .
Template Conservation
. . .
Template Sequence
M I E .
R R K I A V I G S .
G Q I G G N I A Y I V G K D N L A D V V .
L F D I A E G I P Q G K A L D I T H S M V M F G S T S K V I G T N D Y A D I S G S D V V I
Template Known Secondary structure
. . S T S . S S S S T G G G G T T S
Template Predicted Secondary structure
. . .
Template SS confidence
17 . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70 . . . . . . . . . 80 . . . . . . . . . 90 . . .
78 . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140 . . . . . .
Predicted Secondary structure
. . . . . . . . .
Query SS confidence
.
.
.
.
.
.
.
.
.
Query Sequence
D F .
.
.
.
.
.
.
.
.
T R P E G T L N H L A F C R Q H G K G M V I G T T G F D E A G K Q A I R D A A A D I A I V F A A N F S V G V N V M L K L L E K A A K V
Query Conservation
. . . . . . . . .
Alig confidence
. . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Conservation
. . . . . . . . . . . . . . . . . .
Template Sequence
I T A S I P G R P K D D R S E L L F G N A R I L D .
.
.
.
.
.
.
.
.
.
.
.
.
.
.
S V A E G V K K Y C P N A F V I C I T N P .
.
.
L D V M V S H F Q K V S G L
Template Known Secondary structure
S S S S G G G G . . . . . . . . . . . . . . . T T S S S . . .
Template Predicted Secondary structure
. . . . . . . . . . . . . . . . . .
Template SS confidence
96 . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140 . . . . . . . . . 150 . . . . .
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre serverKelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]
