Job Description P04036 Confidence 98.97% Date Thu Jan 5 10:58:10 GMT 2012 Rank 101 Aligned Residues 91 % Identity 12% Template c2dt5A_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:at-rich dna-binding protein; PDBTitle: crystal structure of ttha1657 (at-rich dna-binding protein) from2 thermus thermophilus hb8 Resolution 2.16 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70		.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																																																						.
Query SS confidence																																																																						.
Query Sequence		D	A	N	I	R	V	A	I	A	G	A	G	G	R	M	G	R	Q	L	I	Q	A	A	L	A	L	E	G	V	Q	L	G	A	A	L	E	R	E	G	S	S	L	L	G	S	D	A	G	E	L	A	G	A	G	K	T	G	V	T	V	Q	S	S	L	D	A	V	K	.	D	D	F	D	V	F	I	D	F	T	R
Query Conservation																																																																						.
Alig confidence													.																														.	.	.	.	.	.	.																					.
Template Conservation													.																														.	.	.	.	.	.	.
Template Sequence		N	R	K	W	G	L	C	I	V	G	M	.	G	R	L	G	S	A	L	A	D	Y	P	G	F	G	E	S	F	E	L	R	G	F	F	D	V	D	P	E	K	.	.	.	.	.	.	.	V	G	R	P	V	R	G	G	V	I	E	H	V	D	L	L	P	Q	R	V	P	G	R	I	E	I	A	L	L	T	V	P
Template Known Secondary structure		T	S										.	S										S				S	S									S		T	T	T	.	.	.	.	.	.	.	T	T				T	T						G	G	G					S	T	T	T								S
Template Predicted Secondary structure													.																														.	.	.	.	.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.								.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	E	G	T	L	N	H	L	A	F	C	R	Q	H	G	K	G	M	V	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	E	A	A	Q	K	A	A	D	L	L	V	A	A	G	I	K	G	I	L
Template Known Secondary structure																T
Template Predicted Secondary structure
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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