Job Description P04036 Confidence 96.97% Date Thu Jan 5 10:58:10 GMT 2012 Rank 352 Aligned Residues 127 % Identity 19% Template c2dfdD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:malate dehydrogenase; PDBTitle: crystal structure of human malate dehydrogenase type 2 Resolution 1.90 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.		.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																										.																		.	.	.	.	.	.
Query SS confidence																																																										.																		.	.	.	.	.	.
Query Sequence		R	V	A	I	A	G	A	G	G	R	M	G	R	Q	L	I	Q	A	A	L	A	L	E	G	V	Q	L	G	A	A	L	E	R	E	G	S	S	L	L	G	S	D	A	G	E	L	A	G	A	G	K	T	G	V	T	V	.	Q	S	S	L	D	A	V	K	D	D	F	D	V	F	I	D	F	.	.	.	.	.	.
Query Conservation																																																										.																		.	.	.	.	.	.
Alig confidence																																																										.																		.	.	.	.	.	.
Template Conservation
Template Sequence		K	V	A	V	L	G	A	S	G	G	I	G	Q	P	L	S	L	L	L	K	N	S	P	L	V	S	R	L	T	L	Y	D	I	A	H	T	P	G	V	A	A	D	L	S	H	I	E	T	K	A	A	V	K	G	Y	L	G	P	E	Q	L	P	D	C	L	K	G	C	D	V	V	V	I	P	A	G	V	P	R	K
Template Known Secondary structure							T	T	T	S	T	T												T	T									S	S	S									T	T	S	S	S	S								S	G	G	G						T	T		S							S
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
					80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	T	R	P	E	G	T	L	N	H	L	A	F	C	R	Q	H	G	K	G	M	V	I	G	T	T	G	F	D	E	A	G	K	Q	A	I	R	D	A	A	A	D	I	A	I	V	F	A	A	N	F	S	V	G	V	N	V	M	L	K	L	L	E	K	A	A	K	V	M	G	D	Y	T
Query Conservation		.	.	.
Alig confidence		.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.
Template Sequence		P	G	M	T	R	D	D	L	F	N	T	N	A	T	I	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	T	L	T	A	A	C	A	Q	H	C	P	E	A	M	I	C	V	I	A	N	P	.	.	.	V	N	S	T	I	P	I	T	A	E	V	F	K	K	H	G	V	Y	N
Template Known Secondary structure		T	T			G	G	G	G									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												T	T	S						S	S		.	.	.															T	T
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.																.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.				.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions