Return to main results Retrieve Phyre Job Id

Job DescriptionP04036
Confidence98.93%DateThu Jan 5 10:58:10 GMT 2012
Rank107Aligned Residues96
% Identity22%Templatec1s7cA_
PDB info PDB header:structural genomics, oxidoreductaseChain: A: PDB Molecule:glyceraldehyde 3-phosphate dehydrogenase a; PDBTitle: crystal structure of mes buffer bound form of glyceraldehyde 3-2 phosphate dehydrogenase from escherichia coli
Resolution2.04 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40.........50.........60...
Predicted Secondary structure 






















.....................
Query SS confidence 


























































. . . . . . . . . . . . . . . . . . . . .
Query Sequence  NIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQ. . . . . . . . . . . . . . . . . . . . .
Query Conservation   






  
 

  
   
      



                            .....................
Alig confidence 








.
















































.....................
Template Conservation 







 .




   
 
      






       
 
   

  
     
      
 
 
  
 
     
Template Sequence  TIKVGINGF. GRIGRIVFRAAQKRSDIEIVAINDLLDADYMAYMLKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERDP
Template Known Secondary structure 


.STT
SSSSS


TTT
S
SS
SSS
TT

SSG
Template Predicted Secondary structure 


.
























Template SS confidence 















































































   2.......10 .........20.........30.........40.........50.........60.........70.........80
 
   64.....70.........80.........90.........100.
Predicted Secondary structure 









Query SS confidence 





































Query Sequence  SSLDAVKDDFDVFIDFTRPEGTLNHLAFCRQHGKGMVI
Query Conservation    
       




 
 
         

  
  


Alig confidence 





































Template Conservation    
 
   






 

     
 
   
 



 

Template Sequence  ANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVV
Template Known Secondary structure  GG

GGGGT
S
SSS

STT
S
Template Predicted Secondary structure 



















Template SS confidence 





































   81........90.........100.........110........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions