Job Description P04036 Confidence 97.52% Date Thu Jan 5 10:58:10 GMT 2012 Rank 285 Aligned Residues 166 % Identity 15% Template c1ojuA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:malate dehydrogenase; PDBTitle: 2.8 a resolution structure of malate dehydrogenase from2 archaeoglobus fulgidus in complex with etheno-nad. Resolution 2.79 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.			.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80		.
Predicted Secondary structure																																											.	.																		.																		.
Query SS confidence																																											.	.																		.																		.
Query Sequence		I	R	V	A	I	A	G	A	G	G	R	M	G	R	Q	L	I	Q	A	A	L	A	L	E	G	V	Q	L	G	A	A	L	E	R	E	G	S	S	L	L	G	.	.	S	D	A	G	E	L	A	G	A	G	K	T	G	V	T	V	Q	.	S	S	L	D	A	V	K	D	D	F	D	V	F	I	D	F	T	.	R
Query Conservation																																											.	.																		.																		.
Alig confidence										.																																	.	.																		.																		.
Template Conservation										.
Template Sequence		M	K	L	G	F	V	G	A	.	G	R	V	G	S	T	S	A	F	T	C	L	L	N	L	D	V	D	E	I	A	L	V	D	I	A	E	D	L	A	V	G	E	A	M	D	L	A	H	A	A	A	G	I	D	K	Y	P	K	I	V	G	G	A	D	Y	S	L	L	K	G	S	E	I	I	V	V	T	A	G	L
Template Known Secondary structure										.	S														S			S							S	S																	T	T	T									S		G	G	G	G	T	T		S
Template Predicted Secondary structure										.
Template SS confidence
		22	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	E	G	T	L	N	H	L	A	F	C	R	Q	H	G	K	G	M	V	I	G	T	T	G	F	D	E	A	G	K	Q	A	I	R	D	A	A	A	D	I	A	I	V	F	A	A	N	F	S	V	G	V	N	V	M	L	K	L	L	E	K	A	A	K	V	M	G	D	Y	T	D	I	E	I	I	E	A	H	H	R
Query Conservation
Alig confidence																					.	.	.	.	.	.	.																							.	.	.																		.	.	.	.						.	.	.
Template Conservation																					.	.	.	.	.	.	.																							.	.	.																		.	.	.	.						.	.	.
Template Sequence		A	R	K	P	G	M	T	R	L	D	L	A	H	K	N	A	G	I	I	.	.	.	.	.	.	.	K	D	I	A	K	K	I	V	E	N	A	P	E	S	K	I	L	V	V	T	N	P	.	.	.	M	D	V	M	T	Y	I	M	W	K	E	S	G	K	P	R	N	.	.	.	.	E	V	F	G	M	.	.	.
Template Known Secondary structure					S	S															.	.	.	.	.	.	.									T	T	S	T	T							S	S	S	.	.	.												S				T	T	.	.	.	.	S					.	.	.
Template Predicted Secondary structure																					.	.	.	.	.	.	.																							.	.	.																		.	.	.	.						.	.	.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.								120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.				.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.					.	160	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.				.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.
Query SS confidence																		.	.	.
Query Sequence		H	K	V	D	A	P	S	G	T	A	L	A	M	G	E	A	.	.	.	I	A	H	A	L	D	K	D	L	K	D	C	A	V	Y	S	R	E	G
Query Conservation																		.	.	.
Alig confidence		.	.	.	.	.	.	.										.	.	.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	G	N	Q	L	D	S	Q	R	L	K	E	R	L	Y	N	A	G	A	R	N	I	R	R	A	W	I	I	G	E	H	G
Template Known Secondary structure		.	.	.	.	.	.	.	S															T	T		B	S								B		S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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