Job Description P04036 Confidence 96.18% Date Thu Jan 5 10:58:10 GMT 2012 Rank 434 Aligned Residues 99 % Identity 18% Template c1dxyA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:d-2-hydroxyisocaproate dehydrogenase; PDBTitle: structure of d-2-hydroxyisocaproate dehydrogenase Resolution 1.86 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.			.	.	.
Predicted Secondary structure																																																																													.	.
Query SS confidence																																																																													.	.
Query Sequence		R	V	A	I	A	G	A	G	G	R	M	G	R	Q	L	I	Q	A	A	L	A	L	E	G	V	Q	L	G	A	A	L	E	R	E	G	S	S	L	L	G	S	D	A	G	E	L	A	G	A	G	K	T	G	V	T	V	Q	S	S	L	D	A	V	K	D	D	F	D	V	F	I	D	F	T	R	.	.	P	E	G
Query Conservation																																																																													.	.
Alig confidence									.															.							.									.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Template Conservation									.															.							.									.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	V	G	V	M	G	T	.	G	H	I	G	Q	V	A	I	K	L	F	K	G	F	.	G	A	K	V	I	A	.	Y	D	P	Y	P	M	K	G	.	.	.	.	.	.	.	.	.	.	.	.	D	H	P	D	F	D	Y	V	S	L	E	D	L	F	K	Q	S	D	V	I	D	L	H	V	P	G	I	E	Q	N
Template Known Secondary structure									.	S													T	.	T						.			S	S			S	S	.	.	.	.	.	.	.	.	.	.	.	.			T	T														S										G	G	G
Template Predicted Secondary structure									.															.							.									.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		147	.	.	150	.	.	.		.	.	.	.	.	.	160	.	.	.	.	.	.	.		.	.	170	.	.	.		.	.	.	.	.	.	180	.													.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		85	.				.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure				.	.	.
Query SS confidence				.	.	.
Query Sequence		T	L	.	.	.	N	H	L	A	F	C	R	Q	H	G	K	G	M	V	I	G	T	T	G	F	D	E	A	G	K	Q	A	I	R	D	A	A	A	D
Query Conservation				.	.	.
Alig confidence				.	.	.
Template Conservation
Template Sequence		T	H	I	I	N	E	A	A	F	N	L	M	K	P	G	A	I	V	I	N	T	A	R	P	N	L	I	D	T	Q	A	M	L	S	N	L	K	S	G
Template Known Secondary structure		T	T	S	B								S		T	T							S		T	T	S	B											T	T
Template Predicted Secondary structure
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions