Job Description P04036 Confidence 97.99% Date Thu Jan 5 10:58:10 GMT 2012 Rank 221 Aligned Residues 129 % Identity 23% Template c1b8vA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:protein (malate dehydrogenase); PDBTitle: malate dehydrogenase from aquaspirillum arcticum Resolution 2.10 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.						.	.	.	.	.	.	.	40	.	.	.							.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																																.	.	.	.	.												.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.												.	.	.	.	.	.
Query Sequence		D	A	N	I	R	V	A	I	A	G	A	G	G	R	M	G	R	Q	L	I	Q	A	A	L	A	L	E	G	V	Q	.	.	.	.	.	L	G	A	A	L	E	R	E	G	S	S	.	.	.	.	.	.	L	L	G	S	D	A	G	E	L	A	G	A	G	K	T	G	V	T	V	Q	S	S	L	D	A	V	K	D
Query Conservation																																.	.	.	.	.												.	.	.	.	.	.
Alig confidence																																.	.	.	.	.												.	.	.	.	.	.
Template Conservation
Template Sequence		K	T	P	M	R	V	A	V	T	G	A	A	G	Q	I	C	Y	S	L	L	F	R	I	A	N	G	D	M	L	G	K	D	Q	P	V	I	L	Q	L	L	E	I	P	N	E	K	A	Q	K	A	L	Q	G	V	M	M	E	I	D	D	C	A	F	P	L	L	A	G	M	T	A	H	A	D	P	M	T	A	F	K
Template Known Secondary structure											S	T	T	S												T	T	T	T	T		T	T											S																	T	T	T		T	T								S						T	T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		72	.	.	.	.	.	.	.										80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.		.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.																																								.
Query SS confidence										.	.	.	.	.	.	.	.	.																																								.
Query Sequence		D	F	D	V	F	I	D	F	.	.	.	.	.	.	.	.	.	T	R	P	E	G	T	L	N	H	L	A	F	C	R	Q	H	G	K	G	M	V	I	G	T	T	G	F	D	E	A	G	K	Q	A	I	R	D	A	A	.	A	D	I	A	I	V	F	A	A	N	F	S	V	G	V	N	V	M	L	K	L	L	E
Query Conservation										.	.	.	.	.	.	.	.	.																																								.
Alig confidence										.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.												.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.
Template Sequence		D	A	D	V	A	L	L	V	G	A	R	P	R	G	P	G	M	E	R	K	D	L	L	E	A	N	A	Q	I	F	T	V	Q	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	A	I	D	A	V	A	S	R	N	I	K	V	L	V	V	G	N	P	.	.	.	A	N	T	N	A	Y	I	A	M
Template Known Secondary structure		T		S												T	T																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							S		T	T							S	S	S	.	.	.
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.																.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.				.	.	.	.	140	.	.	.	.
		142	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	A	K	V	M	G	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	S	A	P	S	L	P	A
Template Known Secondary structure			T		T	T	S		G
Template Predicted Secondary structure
Template SS confidence
		145	.	.	.	.	150	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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