Job Description P45766 Confidence 99.91% Date Thu Jan 5 12:03:41 GMT 2012 Rank 34 Aligned Residues 217 % Identity 13% Template d2f34a1 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.74

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		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.								.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	V	Q	C	G	I	S	D	G	L	P	G	F	S	Y	A	D	A	D	.	.	.	.	.	.	.	G	K	F	S	G	I	D	V	D	I	C	R	G	V	A	A	A	V	F	G	D	D	T	K	V	K	Y	T	P	L	T	A	K	E	R	F	T	A	L	Q	S	G	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																					.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.										.	.	.	.	.	.	.																						.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.																																						.	.	.
Template Sequence		T	L	I	V	T	T	I	L	E	.	E	P	Y	V	M	Y	R	K	S	D	K	P	L	Y	G	N	D	R	F	E	G	Y	C	L	D	L	L	K	E	L	S	N	I	L	G	F	L	.	.	.	Y	D	V	K	L	V	P	D	G	K	Y	G	A	Q	N	D	K	G	E	W	N	G	M	V	K	E	L	I	D	H
Template Known Secondary structure										B	.	T	T	T	B				S			S				G	G	G	G			S														T			.	.	.							T	T						B		T	T	S		B									T	T
Template Predicted Secondary structure											.																																						.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.		.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50				.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.		.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.									.	.
Predicted Secondary structure																																												.																												.	.	.	.	.	.	.	.
Query SS confidence																																												.																												.	.	.	.	.	.	.	.
Query Sequence		E	V	D	L	L	S	R	N	T	T	W	T	S	S	R	D	A	G	M	G	M	A	F	T	G	V	T	Y	Y	D	G	I	G	F	L	T	H	D	K	A	G	L	.	K	S	A	K	E	L	D	G	A	T	V	C	I	Q	A	G	T	D	T	E	L	N	V	A	D	Y	F	.	.	.	.	.	.	.	.	K	A
Query Conservation																																												.																												.	.	.	.	.	.	.	.
Alig confidence																				.	.																							.																												.	.	.	.	.	.	.	.
Template Conservation																				.	.
Template Sequence		R	A	D	L	A	V	A	P	L	T	I	T	Y	V	R	E	K	V	.	.	I	D	F	S	K	P	F	M	T	L	G	I	S	I	L	Y	R	K	P	I	D	S	A	D	D	L	A	K	Q	T	K	I	E	Y	G	A	V	R	D	G	S	T	M	T	F	F	K	K	S	K	I	S	T	Y	E	K	M	W	A	F
Template Known Secondary structure		S		S				S	S		B							T	T	.	.					S		S															S						T		S	S	S					B	T	T	S
Template Predicted Secondary structure																				.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.			.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	N	M	K	Y	T	P	V	T	F	D	R	S	D	E	S	A	K	A	L	E	S	G	R	C	D	T	L	A	S	D	Q	S	Q	L	Y	A	L	R	I	K	L	S	N	P	A	E	W	I	V	L	P	E	V	I	S	K	E	P	L	G	P	V	V	R	R	G	D	D	E	W	F	S	I	V	R	W	T	L	F
Query Conservation
Alig confidence																																											.	.	.	.																									.
Template Conservation																																											.	.	.	.																									.
Template Sequence		M	S	S	R	Q	Q	S	A	L	V	K	N	S	D	E	G	I	Q	R	V	L	T	T	D	Y	A	L	L	M	E	S	T	S	I	E	Y	V	T	Q	R	N	.	.	.	.	C	N	L	T	Q	I	G	G	L	I	D	S	K	G	Y	G	V	G	T	P	I	G	S	P	.	Y	R	D	K	I	T	I	A	I	L
Template Known Secondary structure					T					S	B	S	S											S	S																		.	.	.	.	T	T					S	S		S	S										T	T		T	.	T
Template Predicted Secondary structure																																											.	.	.	.																									.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.					.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.		.	.	.	.	230	.	.	.	.	.
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	M	L	N	A	E	E	M	G	I	N	S	Q	N	V	D	E	K	A	A	N	P	A	T	P	D	M	A	H	L	L	G	K	E	G	D	Y	G	K	D	L	K	L	D	N	K	W	A	Y	N	I	I	K	Q	V	G	N	Y	S	E	I	F	E	R	N	V
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	Q	E	E	G	K	L	H	M	M	K	E	K	W	W
Template Known Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		236																																																			.	.	.	240	.	.	.	.	.	.	.	.	.	250	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions