Job Description P45766 Confidence 63.74% Date Thu Jan 5 12:03:41 GMT 2012 Rank 151 Aligned Residues 198 % Identity 11% Template d1utha_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 2.2

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		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	G	F	V	Q	C	G	I	S	D	G	L	P	G	F	S	Y	A	D	A	D	G	K	F	S	G	I	D	V	D	I	C	R	G	V	A	A	A	V	F	G	D	D	T	K	V	K	Y	T	P	L	T	A	K	E	R	F	T	A	L	Q	S	G	E	V	D	L	L	S	R	N	T	T	W	T	S	S	R	D	A
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.	.	.	.																.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.																.	.
Template Sequence		T	R	T	F	N	L	A	M	T	D	I	G	.	.	.	.	.	.	.	.	.	.	.	E	M	Y	F	M	P	P	L	M	E	A	L	A	Q	R	.	.	A	P	H	I	Q	I	S	T	L	R	P	N	A	G	N	L	K	E	D	M	E	S	G	A	V	D	L	A	L	G	L	L	P	E	L	Q	T	G	F	F
Template Known Secondary structure														.	.	.	.	.	.	.	.	.	.	.																.	.		T	T								T	T	S	S									T	S									T	T			T	T
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.																.	.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.												.	.	110	.	.	.	.	.	.	.	.	.	120	.	.			.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.		.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure																																								.																						.
Query SS confidence																																								.																						.
Query Sequence		G	M	G	M	A	F	T	G	V	T	Y	Y	D	G	I	G	F	L	T	H	D	K	A	G	L	K	S	A	K	E	L	D	G	A	T	V	C	I	.	Q	A	G	T	D	T	E	L	N	V	A	D	Y	F	K	A	N	N	M	K	Y	.	T	P	V	T	F	D	R	S	D	E	S	A	K	A	L	E	S	G	R
Query Conservation																																								.																						.
Alig confidence																				.	.																			.																						.
Template Conservation																				.	.
Template Sequence		Q	R	R	L	F	R	H	R	Y	V	C	M	F	R	K	D	H	P	.	.	S	A	K	S	P	M	S	L	K	Q	F	S	E	L	E	H	V	G	V	V	A	L	N	T	G	H	G	E	V	D	G	L	L	E	R	A	G	I	K	R	R	M	R	L	V	V	P	H	F	I	A	I	G	P	I	L	H	S	T	D
Template Known Secondary structure																T	T		S	.	.	S			S	S									S								T	T	S	G	G	G	G								T	T										S	S	S	T	T							T	S	S
Template Predicted Secondary structure																				.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180			.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.				.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																												.	.	.
Query SS confidence																																												.	.	.
Query Sequence		C	D	T	L	A	S	D	Q	S	Q	L	Y	A	L	R	I	K	L	S	N	P	A	E	W	I	V	L	P	E	V	I	S	K	E	P	L	G	P	V	V	R	R	.	.	.	G	D	D	E	W	F	S	I	V	R	W	T	L	F	A	M
Query Conservation																																												.	.	.
Alig confidence											.	.	.																															.	.	.
Template Conservation											.	.	.
Template Sequence		L	I	A	T	V	P	Q	R	F	.	.	.	A	V	R	C	E	V	P	F	G	L	T	T	S	P	H	P	A	K	L	P	D	I	A	I	N	L	F	W	H	A	K	Y	N	R	D	P	G	N	M	W	L	R	Q	L	F	V	E	L	F
Template Known Secondary structure			B								.	.	.					T	T	T	T	T							S	S													G	G	G	T	T
Template Predicted Secondary structure											.	.	.
Template SS confidence
		241	.	.	.	.	.	.	.	.				250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions