Job Description P45766 Confidence 98.98% Date Thu Jan 5 12:03:41 GMT 2012 Rank 51 Aligned Residues 166 % Identity 14% Template d1us5a_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.5

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		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.			.	.	.	.	80	.	.	.	.	.		.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.												.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.											.																	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.											.																	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	G	K	F	S	G	I	D	V	D	I	C	R	G	V	A	A	A	V	F	G	D	.	.	D	T	K	V	K	Y	T	P	L	T	.	A	K	E	R	F	T	A	L	Q	S	G	E	V	D	L	L	.	.	.	.	.	.	.	.	.	.	.	S	R	N	T	T	W	T	S	S	R	D	A	G	M	G	M	A	F
Query Conservation																								.	.											.																	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.											.																	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	G	S	T	T	G	V	Y	F	P	V	A	T	G	I	A	K	L	V	N	D	A	N	V	G	I	R	A	N	A	R	S	T	G	G	S	V	A	N	I	N	A	I	N	A	G	E	F	E	M	A	L	A	Q	N	D	I	A	Y	Y	A	Y	Q	G	C	C	I	P	A	F	E	G	K	P	V	K	T	I	R	A
Template Known Secondary structure					T	T	S	S																T	S	S									S											T	T	S		S															T		S	S	T	T	T	T	T				T	T
Template Predicted Secondary structure
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.		.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.				.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure																																		.																							.	.	.
Query SS confidence																																		.																							.	.	.
Query Sequence		T	G	V	T	Y	Y	D	G	I	G	F	L	T	H	D	K	A	G	L	K	S	A	K	E	L	D	G	A	T	V	C	I	.	Q	A	G	T	D	T	E	L	N	V	A	D	Y	F	K	A	N	N	M	K	Y	T	.	.	.	P	V	T	F	D	R	S	D	E	S	A	K	A	L	E	S	G	R	C	D	T	L
Query Conservation																																		.																							.	.	.
Alig confidence																																		.																							.	.	.
Template Conservation
Template Sequence		L	A	A	L	Y	P	E	V	V	H	V	V	A	R	K	D	A	G	I	R	T	V	A	D	L	K	G	K	R	V	V	V	G	D	V	G	S	G	T	E	Q	N	A	R	Q	I	L	E	A	Y	G	L	T	F	D	D	L	G	Q	A	I	R	V	S	A	S	Q	G	I	Q	L	M	Q	D	K	R	A	D	A	L
Template Known Secondary structure																T	T	S	S		S	S	G	G	G	G	T	T	S							T	T														T	T			G	G	G	S	S																T	T	S		S
Template Predicted Secondary structure
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	D	Q	S	Q	L	Y	A	L	R	I	K	L	S	N	P	A	E	W	I	V	L	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	Y	T	V	G	L	G	A	S	A	I	Q	Q	L	A	L	T	T	P	I	A	L	V	A
Template Known Secondary structure							T	T											S
Template Predicted Secondary structure
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions