Job Description P45766 Confidence 94.80% Date Thu Jan 5 12:03:41 GMT 2012 Rank 105 Aligned Residues 132 % Identity 14% Template d1sw5a_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.80

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		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.			.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.															.	.	.	.	.	.	110	.											.	.	.	.	.
Predicted Secondary structure																								.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.
Query Sequence		D	I	C	R	G	V	A	A	A	V	F	G	D	D	T	K	V	K	Y	T	P	L	.	.	T	A	K	E	R	F	T	A	L	Q	S	G	E	V	D	L	L	S	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	T	T	W	T	S	S	R	.	.	.	.	.	.	.	.	.	.	D	A	G	M	G
Query Conservation																								.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.							.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.
Template Sequence		N	M	I	A	I	L	L	E	E	N	G	Y	K	.	.	.	A	E	V	K	E	G	L	G	G	T	L	V	N	Y	E	A	L	K	R	N	D	I	Q	L	Y	V	E	Y	T	G	T	A	Y	N	V	I	L	R	K	Q	P	P	E	L	W	D	Q	Q	Y	I	F	D	E	V	K	K	G	L	L	E	A	D	G	V
Template Known Secondary structure											T	T			.	.	.					T	T			S											T	S	S	S												T	T	S						S	S
Template Predicted Secondary structure															.	.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.				.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.					.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.						.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.																												.	.	.	.	.
Query SS confidence																					.	.	.	.																												.	.	.	.	.
Query Sequence		M	A	F	T	G	V	T	Y	Y	D	G	I	G	F	L	T	H	D	K	.	.	.	.	A	G	L	K	S	A	K	E	L	D	G	A	T	V	C	I	Q	A	G	T	D	T	E	L	N	V	A	.	.	.	.	.	D	Y	F	K	A	N	N	M	K	Y	T	P	V	T	F	D	R	S	D	E	S	A	K	A	L
Query Conservation																					.	.	.	.																												.	.	.	.	.
Alig confidence																					.	.	.	.																												.	.	.	.	.
Template Conservation
Template Sequence		V	V	A	A	K	L	G	F	R	D	D	Y	A	L	A	V	R	A	D	W	A	E	E	N	G	V	E	K	I	S	D	L	A	E	F	A	D	Q	L	V	F	G	S	D	P	E	F	A	S	R	P	D	G	L	P	Q	I	K	K	V	Y	G	F	E	F	K	E	V	K	Q	M	E	P	T	L	M	Y	E	A	I
Template Known Secondary structure																										T			B	G	G	G	G	T	T	T	G	G	G												S	T	T	S									T				S							G	G	G
Template Predicted Secondary structure
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		188	.	190	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	S	G	R	C	D	T	L	A	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	N	K	Q	V	D	V	I	P	A
Template Known Secondary structure			T	T	S		S
Template Predicted Secondary structure
Template SS confidence
		180	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions