Job Description P45766 Confidence 93.40% Date Thu Jan 5 12:03:41 GMT 2012 Rank 114 Aligned Residues 238 % Identity 14% Template d1sbpa_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.70

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		63	.	.	.	.	.	.	70	.	.	.				.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.		.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120												.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.																								.																									.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.																								.																									.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	I	C	R	G	V	A	A	A	V	F	.	.	.	G	D	D	T	K	V	K	Y	T	P	L	T	A	K	E	R	F	T	A	L	Q	S	G	.	E	V	D	L	L	S	R	N	T	T	W	T	S	S	R	D	A	G	M	G	M	A	F	T	.	.	.	.	.	.	.	.	.	.	.	G	V	T	Y	Y	D	G
Query Conservation													.	.	.																								.																									.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.																								.																									.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	Y	N	K	A	F	S	A	H	W	K	Q	E	T	G	D	N	V	V	I	D	Q	S	H	G	G	S	G	K	Q	A	T	S	V	I	N	G	I	E	A	D	T	V	T	L	A	L	A	Y	D	V	N	A	I	A	E	R	G	R	I	D	K	N	W	I	K	R	L	P	D	D	S	A	P	Y	T	S	T	I	V
Template Known Secondary structure																S										S											T	T				S					S	S										T	T	S	S		T	T	G	G	G	G	S						S			B
Template Predicted Secondary structure
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.																								.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	G	F	L	T	H	D	K	A	G	L	K	S	A	K	E	L	D	G	A	T	V	C	I	Q	A	G	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	T	E	L	N	V	A	D	Y	F	K	A	N	N	M	K	Y	T	P	V	T	F	D	R	S	D	E	S	A
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	L	V	R	K	G	N	P	K	Q	I	H	D	W	N	D	L	I	K	P	G	V	S	V	I	T	P	N	P	K	S	S	G	G	A	R	W	N	Y	L	A	A	W	G	Y	A	L	H	H	N	N	N	D	Q	A	K	A	E	D	F	V	K	A	L	F	K	N	V	E	V	L	D	S	G	A	R	G	S	T	N
Template Known Secondary structure						T	T		T	T				S	G	G	G	G	G	S	T	T								T	T	T																			T	T	T															T						S	S
Template Predicted Secondary structure
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	L	E	S	G	R	C	D	T	L	A	S	D	Q	S	Q	L	Y	A	L	R	I	K	L	S	N	P	A	E	W	I	V	L	P	E	V	I	S	K	E	P	L	G	P	V	V	R	R	G	D	D	E	W	F	S	I	V	R	W	T	L	F	A	M	L	N	A	E	E	M	G	I	N	S	Q	N	V	D	E
Query Conservation
Alig confidence																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	F	V	E	R	G	I	G	D	V	L	I	A	W	E	N	E	A	L	L	A	T	N	E	L	G	K	D	K	F	E	I	V	T	P	S	E	S	I	L	A	E	P	T	V	S	V	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	K	V	V	E	K	K	D	T	K	A	V	A	E	A
Template Known Secondary structure					T	S				S															T	T	T	T	T	T							S					B								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.																		.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.									.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.
Query Sequence		K	A	A	N	P	A	T	P	D	M	A	H	L	L	G	K	E	G	D	Y	G	K	D	L	K	L	D	N	K	W	A	.	.	.	.	.	.	.	.	Y	N	I	I	K	Q	V	G	N	Y	S	E	I	F	E	R	N	V	G	S	E	S
Query Conservation																																	.	.	.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	L	K	Y	L	Y	S	P	E	G	Q	E	I	A	A	K	N	F	Y	R	P	R	D	A	D	V	A	K	K	Y	D	D	A	F	P	K	L	K	L	F	T	I	D	E	V	F	G	G	W	A	K	A	Q	K	D	H	F	A	D	G	G
Template Known Secondary structure					G	G	G	S										T	T				S								T	G	G	G	S													S	S									T	S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions