Job Description P45766 Confidence 96.66% Date Thu Jan 5 12:03:41 GMT 2012 Rank 92 Aligned Residues 187 % Identity 13% Template d1ryoa_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Transferrin Resolution 1.20

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		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.		.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.		.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.										.	130	.
Predicted Secondary structure																						.																														.																		.	.	.	.	.	.	.	.	.
Query SS confidence																						.																														.																		.	.	.	.	.	.	.	.	.
Query Sequence		D	I	C	R	G	V	A	A	A	V	F	G	D	D	T	K	V	K	Y	T	.	P	L	T	A	K	E	R	F	T	A	L	Q	S	G	E	V	D	L	L	S	R	N	T	T	W	T	S	S	R	.	D	A	G	M	G	M	A	F	T	G	V	T	Y	Y	D	G	I	.	.	.	.	.	.	.	.	.	G	F	L
Query Conservation																						.																														.																		.	.	.	.	.	.	.	.	.
Alig confidence																						.																														.																		.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	F	R	D	H	M	K	S	V	I	P	S	D	G	P	S	V	A	C	V	K	K	A	S	Y	L	D	C	I	R	A	I	A	A	N	E	A	D	A	V	T	L	D	A	G	L	V	Y	D	A	Y	L	A	P	N	N	L	K	P	V	V	A	E	F	Y	G	S	K	E	D	P	Q	T	F	Y	Y	A	V	A	V
Template Known Secondary structure											S		T	T	S									S	S										T	T	S			B													S	T	T	T													S	S	S			S
Template Predicted Secondary structure
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.			.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure																						.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	H	D	K	A	G	L	K	S	A	K	E	L	D	G	A	T	V	C	I	.	.	Q	A	G	T	D	T	E	L	N	V	A	D	Y	F	K	A	N	N	M	K	Y	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																						.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.													.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.
Template Sequence		V	K	K	D	S	G	F	.	Q	M	N	Q	L	R	G	K	K	S	C	H	T	G	L	G	R	S	A	G	W	N	I	P	I	G	L	L	Y	C	D	L	P	E	P	R	K	P	L	E	K	A	V	A	N	F	F	S	G	S	C	A	P	C	A	D	G	T	D	F	P	Q	L	C	Q	L	C	P	G	C	G	C
Template Known Secondary structure				T	T				.		G	G	G		T	T						S		T	T		T	T	T	T								G	G	G	S		S				S									S	S	S				T	T	S		T	T	T		G	G	G	G	T	T	S	T	T			S
Template Predicted Secondary structure									.
Template SS confidence
		101	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
				174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.															.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure		.	.																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	P	V	T	F	D	R	S	D	E	S	A	K	A	L	E	S	G	R	C	D	T	L	A	S	D	Q	S	Q	L	Y	A	L	R	I	K	L	S	N	P	A	E	W	I	V	L	P	E	V	I	S	K	E	P	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	P	V	V	R	R	G	D	D	E
Query Conservation		.	.																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.							.
Template Conservation																																																																														.
Template Sequence		S	T	L	N	Q	Y	F	G	Y	S	G	A	F	K	C	L	K	D	G	A	G	D	V	A	F	V	K	H	S	T	I	F	E	N	L	A	N	K	A	D	R	D	Q	Y	E	L	L	C	L	D	N	T	R	K	P	V	D	E	Y	K	D	C	H	L	A	Q	V	P	S	H	T	V	V	A	R	S	.	M	G	G
Template Known Secondary structure		S	T	T	S	T	T												T	T	S		S						T	T								S					T	T						T	T	S					G	G	G	G	G	G	S		S												S	.	S	S
Template Predicted Secondary structure																																																																														.
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.		.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	F	S	I	V	R	W	T	L	F	A	M	L	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	E	D	L	I	W	E	L	L	N	Q	A	Q	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		259	260	.	.	.	.	.	.	.	.	.	270	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions