Job Description P45766 Confidence 97.32% Date Thu Jan 5 12:03:41 GMT 2012 Rank 78 Aligned Residues 157 % Identity 14% Template d1r9la_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.59

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		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.		.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.							.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure																									.																														.	.	.	.	.	.
Query SS confidence																									.																														.	.	.	.	.	.
Query Sequence		I	D	V	D	I	C	R	G	V	A	A	A	V	F	G	D	D	T	K	V	K	Y	T	.	P	L	T	A	K	E	R	F	T	A	L	Q	S	G	E	V	D	L	L	S	R	N	T	T	W	T	S	S	R	.	.	.	.	.	.	D	A	G	M	G	M	A	F	T	G	V	T	Y	Y	D	G	I	G	F	L	T
Query Conservation																									.																														.	.	.	.	.	.
Alig confidence																		.	.	.					.																														.	.	.	.	.	.
Template Conservation																		.	.	.
Template Sequence		F	Q	T	L	L	V	S	R	A	L	E	K	L	G	Y	T	.	.	.	V	N	K	P	S	E	V	D	Y	N	V	G	Y	T	S	L	A	S	G	D	A	T	F	T	A	V	N	W	T	P	L	H	D	N	M	Y	E	A	A	G	G	D	K	K	F	Y	R	E	G	V	F	V	N	G	A	A	Q	G	Y	L	I
Template Known Secondary structure														T	T			.	.	.																			T	S	S									T	T	T							T	T	G	G	G	T					S		S
Template Predicted Secondary structure																		.	.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.				.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		133	.	.	.					.	.	.	140	.	.	.	.																.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180						.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.
Query SS confidence						.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.
Query Sequence		H	D	K	A	.	.	.	.	G	L	K	S	A	K	E	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	G	A	T	V	C	I	Q	A	G	T	D	T	E	L	N	V	A	D	Y	F	K	A	N	N	M	K	Y	T	P	V	T	F	D	R	S	.	.	.	.	.	D	E	S	A	K	A	L	E
Query Conservation						.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.
Alig confidence						.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.
Template Conservation
Template Sequence		D	K	K	T	A	D	Q	Y	K	I	T	N	I	A	Q	L	K	D	P	K	I	A	K	L	F	D	T	N	G	D	G	K	A	D	L	T	G	C	N	P	G	W	G	C	E	G	A	I	N	H	Q	L	A	A	Y	E	L	T	N	T	V	T	H	N	Q	G	N	Y	A	A	M	M	A	D	T	I	S	R	Y	K
Template Known Secondary structure										T			B	G	G	G	G	G	S					G	G	G		S	S	S	S	S	S								T	T	S													T	T		T	T	T						S
Template Predicted Secondary structure
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	R	C	D	T	L	A	S	D	Q	S	Q	L	Y	A	L	R	I	K	L	S	N	P	A	E	W	I	V	L	P	E	V
Query Conservation
Alig confidence														.	.
Template Conservation														.	.
Template Sequence		E	G	K	P	V	F	Y	Y	T	W	T	P	.	.	Y	W	V	S	N	E	L	K	P	G	K	D	V	V	W	L	Q	V	P
Template Known Secondary structure		T	T										S	.	.	S	S					S		B	T	T	T					B		S
Template Predicted Secondary structure														.	.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190			.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions