Job Description P45766 Confidence 94.69% Date Thu Jan 5 12:03:41 GMT 2012 Rank 107 Aligned Residues 159 % Identity 14% Template d1jnfa1 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Transferrin Resolution 2.60

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		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.		.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.		.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.										.	130	.
Predicted Secondary structure																							.																														.																	.	.	.	.	.	.	.	.	.
Query SS confidence																							.																														.																	.	.	.	.	.	.	.	.	.
Query Sequence		D	I	C	R	G	V	A	A	A	V	F	G	D	D	T	K	V	K	Y	T	P	.	L	T	A	K	E	R	F	T	A	L	Q	S	G	E	V	D	L	L	S	R	N	T	T	W	T	S	S	R	D	.	A	G	M	G	M	A	F	T	G	V	T	Y	Y	D	G	I	.	.	.	.	.	.	.	.	.	G	F	L
Query Conservation																							.																														.																	.	.	.	.	.	.	.	.	.
Alig confidence																							.																														.																	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	F	R	D	S	M	K	K	V	L	P	E	D	G	P	R	I	I	C	V	K	K	A	S	Y	L	D	C	I	K	A	I	A	A	H	E	A	D	A	V	T	L	D	A	G	L	V	H	E	A	G	L	T	P	N	N	L	K	P	V	V	A	E	F	Y	G	S	K	E	N	P	K	T	F	Y	Y	A	V	A	L
Template Known Secondary structure											S		T	T	S									S	S										T	T	S			B													S	T	T	T										B	S		S	S	S		B	S
Template Predicted Secondary structure
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150																						.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	H	D	K	A	G	L	K	S	A	K	E	L	D	G	A	T	V	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	Q	A	G	T	D	T	E	L	N	V	A	D	Y	F	K	A	N	N	M	K	Y	T	P	V	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.																																																.	.	.	.	.
Template Sequence		V	K	K	G	S	N	F	.	Q	L	N	E	L	Q	G	K	K	S	C	H	T	G	L	G	R	S	A	G	W	N	I	P	I	G	L	L	L	C	D	L	P	E	P	R	K	P	L	E	K	A	V	A	S	F	F	.	.	.	.	.	S	G	S	C	V	P	C	A	D	G	A	D	F	P	Q	L	C	Q	L	C
Template Known Secondary structure				T	T				.		G	G	G		T	T						S		T	T		T	T	T	T								G	G	G	S		S			S	S									S	.	.	.	.	.	S	S				T	T	S		T	T	T		G	G	G	G	T	T	S
Template Predicted Secondary structure									.																																																.	.	.	.	.
Template SS confidence
		101	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.						.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
												177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	F	D	R	S	D	E	S	A	K	A	L	E	S	G	R	C	D	T	L	A	S	D	Q	S	Q	L	Y	A	L	R	I	K	L	S	N	P	A	E	W	I	V	L	P	E	V	I	S	K	E	P	L
Query Conservation		.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	G	C	G	C	S	S	V	Q	P	Y	F	G	Y	S	G	A	F	K	C	L	K	D	G	L	G	D	V	A	F	V	K	Q	E	T	I	F	E	N	L	P	S	K	D	E	R	D	Q	Y	E	L	L	C	L	D	N	T	R	K	P	V
Template Known Secondary structure		T	T				S	T	T	S	T	T												T	T	S		S						T	T								S					T	T						T	T	S					G
Template Predicted Secondary structure
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions