Return to main results Retrieve Phyre Job Id

Job DescriptionP45766
Confidence95.86%DateThu Jan 5 12:03:41 GMT 2012
Rank96Aligned Residues161
% Identity13%Templated1eh3a_
SCOP infoPeriplasmic binding protein-like II Periplasmic binding protein-like II Transferrin
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   63......70.........80...... ...90.........100.........110. ........120..... ....130.
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Query Sequence  DICRGVAAAVFGDDTKVKYTPLTA. KERFTALQSGEVDLLSRNTTWTSSR. DAGMGMAFTGVTYY. . . . . . . . . DGIGFL
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Template Sequence  QWQRNMRRVRGPP. . . VSCIKRDSPIQCIQAIAENRADAVTLDGGFIYEAGLAPYKLRPVAAEVYGTERQPRTHYYAVAV
Template Known Secondary structure  TT


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   21........30... ......40.........50.........60.........70.........80.........90.......
 
   132.......140.........150. ........160.........170......
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Query Sequence  THDKAGLKSAKELDGATVCI. . QAGTDTELNVADYFKANNMKYTPVT. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  VKKGGSF. QLNELQGLKSCHTGLRRTAGWNVPIGTLRPFLDWTGPPEPIEAAVARFFSASCVPGADKGQFPNLCRLCAGT
Template Known Secondary structure  TT


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TT

TT
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TTTTGGGS



TTS
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GGGTTT



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   98.100.... .....110.........120.........130.........140.........150.........160.........170......
 
   177..180.........190.........200.........210.........220.......
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Query Sequence  . . . . . . . . . . . . FDRSDESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPL
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Template Sequence  GENKCAFSSQEPYFSYSGAFKCLRDGAGDVAFIKESTVFEDLSDEAERDEYELLCPDNTRKPV
Template Known Secondary structure  GGGTT
SSTTSTT
TTS
SSS
SSGGGGGG
TTS
G
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   177..180.........190.........200.........210.........220.........230.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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