Job Description P45766 Confidence 95.70% Date Thu Jan 5 12:03:41 GMT 2012 Rank 98 Aligned Residues 161 % Identity 14% Template d1dtza1 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Transferrin Resolution 2.65

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		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.			.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.									.	130	.
Predicted Secondary structure																										.																				.	.																								.	.	.	.	.	.	.	.
Query SS confidence																										.																				.	.																								.	.	.	.	.	.	.	.
Query Sequence		D	I	C	R	G	V	A	A	A	V	F	G	D	D	T	K	V	K	Y	T	P	L	T	A	.	K	E	R	F	T	A	L	Q	S	G	E	V	D	L	L	S	R	N	T	.	.	T	W	T	S	S	R	D	A	G	M	G	M	A	F	T	G	V	T	Y	Y	D	G	I	.	.	.	.	.	.	.	.	G	F	L
Query Conservation																										.																				.	.																								.	.	.	.	.	.	.	.
Alig confidence															.	.	.									.																				.	.																								.	.	.	.	.	.	.	.
Template Conservation															.	.	.
Template Sequence		Q	W	Q	R	R	M	K	K	V	R	G	P	S	.	.	.	V	T	C	V	K	K	T	S	R	F	E	C	I	Q	A	I	S	T	E	K	A	D	A	V	T	L	D	G	G	L	V	Y	D	A	G	L	D	P	Y	K	L	R	P	I	A	A	E	V	Y	G	T	E	N	Q	P	Q	T	H	Y	Y	A	V	A	I
Template Known Secondary structure									T	T	T				.	.	.							S	S										T	T	S			B													S	T	T	T										B	S		S	S	S		B	S
Template Predicted Secondary structure															.	.	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.				.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.		.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure																						.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	H	D	K	A	G	L	K	S	A	K	E	L	D	G	A	T	V	C	I	.	Q	A	G	T	D	T	E	L	N	V	A	D	Y	F	K	A	N	N	M	K	Y	T	P	V	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																						.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.													.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.
Template Sequence		A	K	K	G	T	N	F	.	Q	L	N	Q	L	Q	G	L	K	S	C	H	T	G	L	G	R	S	A	G	W	N	I	P	M	G	L	L	R	P	F	L	D	W	T	G	P	P	E	P	L	Q	K	A	V	A	K	F	F	S	A	S	C	V	P	C	V	D	G	K	E	Y	P	N	L	C	Q	L	C	A	G	T
Template Known Secondary structure				S	S				.		G	G	G		T	T						S		T	T		T	T	T	T							T	G	G	G	T					T	T	S										S	S					T	T	S		T	T	T	S					T	T
Template Predicted Secondary structure									.
Template SS confidence
		98	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
														177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	F	D	R	S	D	E	S	A	K	A	L	E	S	G	R	C	D	T	L	A	S	D	Q	S	Q	L	Y	A	L	R	I	K	L	S	N	P	A	E	W	I	V	L	P	E	V	I	S	K	E	P	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	E	N	K	C	A	C	S	S	Q	E	P	Y	F	G	Y	S	G	A	F	K	C	L	Q	D	G	A	G	D	V	A	F	V	K	D	S	T	V	F	E	S	L	P	A	K	A	D	R	D	Q	Y	E	L	L	C	P	N	N	T	R	K	P	V
Template Known Secondary structure		G	G	G	T	T		S	S	T	T	S	T	T												S	S	S		S						T	T													T	T						T	T	T					G
Template Predicted Secondary structure
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions