Job Description P45766 Confidence 91.32% Date Thu Jan 5 12:03:41 GMT 2012 Rank 122 Aligned Residues 160 % Identity 12% Template d1b1xa2 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Transferrin Resolution 2.62

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		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure																								.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		C	R	G	V	A	A	A	V	F	G	D	D	T	K	V	K	Y	T	P	L	T	A	.	K	E	R	F	T	A	L	Q	S	G	E	V	D	L	L	S	R	N	T	T	W	T	S	S	R	D	A	G	M	G	M	A	F	T	G	V	T	Y	Y	D	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																								.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.									.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.
Template Sequence		C	K	Q	W	S	D	V	S	N	R	K	.	.	.	V	A	C	A	S	A	S	T	T	E	E	C	I	A	L	V	L	K	G	E	A	D	A	L	N	L	D	G	G	F	I	Y	V	A	G	K	C	G	L	V	P	V	L	A	E	N	Q	K	S	Q	N	S	N	A	P	D	C	V	H	R	P	P	E	G	Y	L
Template Known Secondary structure									T	T	S	S	.	.	.							S	S											T	S			B														T	T										S		S	S			S	G	G	G	G	G	S
Template Predicted Secondary structure													.	.	.
Template SS confidence
		358	.	360	.	.	.	.	.	.	.	.				.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150				.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure																									.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	G	F	L	T	H	D	K	A	G	L	K	S	A	K	E	L	D	G	A	T	V	C	.	.	.	I	Q	A	G	T	D	T	E	L	N	V	A	D	Y	F	K	A	N	N	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																									.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	V	A	V	V	R	K	S	D	A	D	L	T	W	N	S	L	S	G	K	K	S	C	H	T	G	V	G	R	T	A	A	W	N	I	P	M	G	L	L	F	N	Q	T	G	S	C	K	F	D	K	F	F	S	Q	S	C	A	P	G	A	D	P	Q	S	S	L	C	A	L	C	V	G	N	N	E	N	E	N	K
Template Known Secondary structure								S	S			S			G	G	G		T	T						S		T	T		T	T	T	T																G	G	G	T	S	S	S				T	T	S		T	T	S	T	T	B	S	S				S	T	T	S		S	T
Template Predicted Secondary structure
Template SS confidence
		435	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.
				171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210									.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure		.	.																																									.	.	.	.	.	.	.	.
Query SS confidence		.	.																																									.	.	.	.	.	.	.	.
Query Sequence		.	.	K	Y	T	P	V	T	F	D	R	S	D	E	S	A	K	A	L	E	S	G	R	C	D	T	L	A	S	D	Q	S	Q	L	Y	A	L	R	I	K	L	S	.	.	.	.	.	.	.	.	N	P	A	E	W	I	V	L	P	E	V	I	S	K	E	P	L
Query Conservation		.	.																																									.	.	.	.	.	.	.	.
Alig confidence		.	.																																									.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		C	M	P	N	S	E	E	R	Y	Y	G	Y	T	G	A	F	R	C	L	A	E	K	A	G	D	V	A	F	V	K	D	V	T	V	L	Q	N	T	D	G	K	N	S	E	P	W	A	K	D	L	K	Q	E	D	F	E	L	L	C	L	D	G	T	R	K	P	V
Template Known Secondary structure		T		S	S	T	T	S	T	T												T	T	S		S											T	T	S	T	T	S	S		S					T			T	T	S						T	T	S					G
Template Predicted Secondary structure
Template SS confidence
		515	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions