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Job Description | P45766 | Confidence | 94.43% | Date | Thu Jan 5 12:03:41 GMT 2012 |
Rank | 110 | Aligned Residues | 84 |
% Identity | 14% | Template | d1b1xa1 |
SCOP info | Periplasmic binding protein-like II
| Periplasmic binding protein-like II
| Transferrin
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Resolution | 2.62 |
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63 | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | |
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Predicted Secondary structure |   |
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Query Sequence |   |
D | I | C | R | G | V | A | A | A | V | F | G | D | D | T | K | V | K | Y | T | P | L | T | A | . |
K | E | R | F | T | A | L | Q | S | G | E | V | D | L | L | S | R | N | T | T | W | T | S | S | . |
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R | D | A | G | M | G | M | A | F | T | G | V | T | . |
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Y | Y | D | G | I | G | F | L |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
K | F | Q | R | N | M | K | K | V | R | G | P | S | . |
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V | S | C | I | R | K | T | S | S | F | E | C | I | Q | A | I | A | A | N | K | A | D | A | V | T | L | D | G | G | L | V | Y | E | A | G | L | H | P | Y | K | L | R | P | V | A | A | E | V | Y | Q | T | R | G | K | P | Q | T | R | Y | Y | A | V | A | V |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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21 | . | . | . | . | . | . | . | . | 30 | . | . | . | |
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. | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . |
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132 | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
T | H | D | K | A | G | L | K | S | A | K | E | L | D | G | A | T | V | C |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
V | K | K | G | S | G | F | . |
Q | L | N | Q | L | Q | G | V | K | S | C |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
98 | . | 100 | . | . | . | . | |
. | . | . | . | . | 110 | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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