Job Description P45766 Confidence 99.02% Date Thu Jan 5 12:03:41 GMT 2012 Rank 48 Aligned Residues 211 % Identity 16% Template c3tqwA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:methionine-binding protein; PDBTitle: structure of a abc transporter, periplasmic substrate-binding protein2 from coxiella burnetii Resolution 2.00 Å

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		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.		.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.				110	.
Predicted Secondary structure																																																			.																										.	.	.
Query SS confidence																																																			.																										.	.	.
Query Sequence		F	V	Q	C	G	I	S	D	G	L	P	G	F	S	Y	A	D	A	D	G	K	F	S	G	I	D	V	D	I	C	R	G	V	A	A	A	V	F	G	D	D	T	K	V	K	Y	T	P	L	.	T	A	K	E	R	F	T	A	L	Q	S	G	E	V	D	L	L	S	R	N	T	T	W	T	S	.	.	.	S	R
Query Conservation																																																			.																										.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.																					.	.	.							.																										.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.																					.	.	.
Template Sequence		X	V	R	V	G	T	I	A	G	.	.	.	.	.	.	.	.	.	.	.	P	E	T	Q	L	X	E	V	A	K	Q	V	A	L	N	R	Y	G	L	H	.	.	.	V	N	I	I	T	F	S	D	Y	N	T	P	N	E	A	L	A	D	G	S	V	D	A	N	X	F	Q	H	L	P	Y	L	K	A	Q	I	E
Template Known Secondary structure									T	T	.	.	.	.	.	.	.	.	.	.	.																					.	.	.							S		T	T	S							T	T	S		S
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.																					.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.												10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.				30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170																	.	.	.	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	A	G	M	G	M	A	F	T	G	V	T	Y	Y	D	G	I	G	F	L	T	H	D	K	A	G	L	K	S	A	K	E	L	D	G	A	T	V	C	I	Q	A	G	T	D	T	E	L	N	V	A	D	Y	F	K	A	N	N	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	Y	T	P	V
Query Conservation																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																		.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.
Template Sequence		X	R	G	Y	K	I	V	S	I	G	K	T	F	V	Y	P	X	G	L	Y	S	K	K	I	T	A	L	T	Q	L	K	T	.	.	G	A	K	I	A	V	P	S	D	P	S	N	E	A	R	A	L	L	L	L	E	K	A	Q	L	I	Q	L	K	T	H	I	N	A	T	P	X	D	I	A	S	N	P	K	K	L
Template Known Secondary structure																							S	S		S	S	G	G	G			T	.	.	T								S														T	T	S											G	G	G					T	T
Template Predicted Secondary structure																																		.	.
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.			.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	F	D	R	S	D	E	S	A	K	A	L	E	S	G	R	C	D	T	L	A	S	D	Q	S	Q	L	Y	A	L	R	I	K	L	S	N	P	A	E	W	I	V	L	P	E	V	I	S	K	E	P	L	G	P	V	V	R	R	G	D	D	E	W	F	S	I	V	R	W	T	L	F	A	M	L	N	A	E	E	M
Query Conservation
Alig confidence																											.	.																																				.
Template Conservation																											.	.																																				.
Template Sequence		K	I	V	E	L	D	A	A	Q	L	S	R	S	L	G	D	V	D	L	A	A	I	N	T	N	.	.	Y	A	I	P	A	G	L	S	P	S	R	D	A	L	L	T	E	G	P	N	S	P	Y	A	N	V	V	A	V	R	E	D	D	K	N	.	D	P	R	L	K	Q	L	V	S	A	L	H	S	P	A	V	L
Template Known Secondary structure								G	G	G	G	G	G		T	T	T		S								.	.			G	G	G	T			T	T	T	T		S					S	S	S	S									G	G	G	T	T	.												T	S
Template Predicted Secondary structure																											.	.																																				.
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.			.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.		.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
		256	.	.	.	260	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	N	S	Q	N	V	D	E	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	A	A	K	K	I	F	G	D	G
Template Known Secondary structure									G	G	G
Template Predicted Secondary structure
Template SS confidence
		224	.	.	.	.	.	230	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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