Return to main results Retrieve Phyre Job Id

Job DescriptionP45766
Confidence98.86%DateThu Jan 5 12:03:41 GMT 2012
Rank54Aligned Residues132
% Identity13%Templatec3l6gA_
PDB info PDB header:glycine betaine-binding proteinChain: A: PDB Molecule:betaine abc transporter permease and substrate binding PDBTitle: crystal structure of lactococcal opuac in its open conformation
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   63......70.........80.........90.........100......... 110.........120.........130.......
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Query Sequence  DICRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTS. . . . . SRDAGMGMAFTGVTYYDGIGFLTHDKAG
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Template Sequence  NVLTQAMKEHGFD. . . VKTTALDNAVAWQTVANGQADGMVSAWLPNTHKTQWQKYGKSVDLLGPNLKGAKVGFVVPSYMN
Template Known Secondary structure  TT...

TTSSSTTTTGGGTTS
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   338.340.........350 .........360.........370.........380.........390.........400.........410....
 
   138.140.........150.........160....... ..170.........180 .........190.......
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Query Sequence  LKSAKELDGATVCIQAGTDTELNVADYFKA. . . . . . NNMKYTPVTFDRS. . . DESAKALESGRCDTLAS
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Template Sequence  VNSIEDLTNQANKTITGIEPGAGVMAASEKTLNSYDNLKDWKLVPSSSGAMTVALGEAIKQHKDIVITG
Template Known Secondary structure 

BGGG
SSGGGG


TT
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   415....420.........430.........440.........450.........460.........470.........480...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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