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Job Description | P45766 | Confidence | 98.86% | Date | Thu Jan 5 12:03:41 GMT 2012 |
Rank | 54 | Aligned Residues | 132 |
% Identity | 13% | Template | c3l6gA_ |
PDB info |
PDB header:glycine betaine-binding protein | Chain: A: PDB Molecule:betaine abc transporter permease and substrate binding |
PDBTitle: crystal structure of lactococcal opuac in its open conformation
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Resolution | 1.90 Å |
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63 | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | |
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110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
D | I | C | R | G | V | A | A | A | V | F | G | D | D | T | K | V | K | Y | T | P | L | T | A | K | E | R | F | T | A | L | Q | S | G | E | V | D | L | L | S | R | N | T | T | W | T | S | . |
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S | R | D | A | G | M | G | M | A | F | T | G | V | T | Y | Y | D | G | I | G | F | L | T | H | D | K | A | G |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
N | V | L | T | Q | A | M | K | E | H | G | F | D | . |
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Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
338 | . | 340 | . | . | . | . | . | . | . | . | . | 350 | |
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138 | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
L | K | S | A | K | E | L | D | G | A | T | V | C | I | Q | A | G | T | D | T | E | L | N | V | A | D | Y | F | K | A | . |
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N | N | M | K | Y | T | P | V | T | F | D | R | S | . |
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Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
V | N | S | I | E | D | L | T | N | Q | A | N | K | T | I | T | G | I | E | P | G | A | G | V | M | A | A | S | E | K | T | L | N | S | Y | D | N | L | K | D | W | K | L | V | P | S | S | S | G | A | M | T | V | A | L | G | E | A | I | K | Q | H | K | D | I | V | I | T | G |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
415 | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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