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Job DescriptionP45766
Confidence98.23%DateThu Jan 5 12:03:41 GMT 2012
Rank65Aligned Residues134
% Identity14%Templatec3gyyC_
PDB info PDB header:transport proteinChain: C: PDB Molecule:periplasmic substrate binding protein; PDBTitle: the ectoine binding protein of the teaabc trap transporter teaa in the2 apo-state
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   63......70.........80.........90.........100.........110.........120...
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Query Sequence  DICRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFTGVT. . . . . . . . . . . . . . . . . . .
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Template Sequence  AFKGYVEDNSDHT. VQVYRFGELSDDIMEQTQNGILQFVNQSPGFTGSLIPSAQIFFIPYLMPTDMDTVLEFFDESKAIN
Template Known Secondary structure  SS
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TT


TTTTS
S
GGG
TTTSGGGGGGGSTTSS
SS
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   21........30... ......40.........50.........60.........70.........80.........90.........
 
   124.....130.........140.........150.........160.........170.........180.......
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Query Sequence  . . . . . . . . . . . . . . . . YYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRSDESAKAL
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Template Sequence  EMFPKLYAEHGLELLKMYPEGEMVVTADEPITSPEDFDNKKIRTMTNPLLAETYKA. . . . . . FGATPTPL. PWGEVYGGL
Template Known Secondary structure  TTTTSS


SGGGSTT


S
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   102.......110.........120.........130.........140.........150....... ..160..... ....170....
 
   188.190.........200....
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Query Sequence  ESGRCDTLASDQSQLYA
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Template Sequence  QTGIIDGQENPIFWIES
Template Known Secondary structure  TS
S
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   175....180.........190.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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