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Job DescriptionP45766
Confidence96.79%DateThu Jan 5 12:03:41 GMT 2012
Rank89Aligned Residues160
% Identity13%Templatec3fd3A_
PDB info PDB header:transcription regulatorChain: A: PDB Molecule:chromosome replication initiation inhibitor protein; PDBTitle: structure of the c-terminal domains of a lysr family protein from2 agrobacterium tumefaciens str. c58.
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   34.....40.........50.........60.........70.........80.........90.........100.........110...
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Query Sequence  KGFVQCGISDGLPGFSYADADGKFSGIDVDICRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDA
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Template Sequence  RVTLNIATNADSLGTW. . . . . . . . . . . . . . FLDAVSKFTGGSDYLVNIAVDDQDHTVEWLRGGRVLAAVTAHDKPVQGCR
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   112.......120....... ..130.........140.........150.........160.........170.......
 
   114.....120.........130.........140.........150. ........160.........170.........180.........190..
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Query Sequence  GMGMAFTGVTYYDGIGFLTHDKAGLKSAKELDGATVCI. QAGTDTELNVADYFKANNMKYTPVTFDRSDESAKALESGRC
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Template Sequence  VTPLGVLRYHATASPDFXARHFADGVTPAALARAPGLTFNQKDRLQASWIRTALGEDVSYPTHWLPSTDGFVKASLAGXG
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   178.180.........190.........200.........210.........220.........230.........240.........250.......
 
   193......200.......
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Query Sequence  DTLASDQSQLYALRI
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Template Sequence  WGLNPVQLVAEHLAA
Template Known Secondary structure  B
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   258.260.........270..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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