Return to main results Retrieve Phyre Job Id

Job DescriptionP45766
Confidence90.67%DateThu Jan 5 12:03:41 GMT 2012
Rank124Aligned Residues83
% Identity14%Templatec3chgB_
PDB info PDB header:ligand binding proteinChain: B: PDB Molecule:glycine betaine-binding protein; PDBTitle: the compatible solute-binding protein opuac from bacillus2 subtilis in complex with dmsa
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   60.........70.........80.........90.........100.........110.. .......120.........130....
Predicted Secondary structure 
















.....














Query SS confidence 




















































. . . . .





















Query Sequence  IDVDICRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRD. . . . . AGMGMAFTGVTYYDGIGFLTHD
Query Conservation 




  


  

    


           

  
  
      
 
  
 .....      
               
Alig confidence 















...

































.....





















Template Conservation    
 
   


 


 ...

            

 



     
 
           
 
  

    

  
  

 
Template Sequence  ASTNVIGKVLEDLGYE. . . VTLTQVEAGPMWTAIATGSADASLSAWLPNTHKAYAAKYKGKYDDIGTSMTGVKMGLVVPQ
Template Known Secondary structure  TTT
...

TTTTSSSTTTTT
TT



T
Template Predicted Secondary structure 


...




















Template SS confidence 















































































   183......190........ .200.........210.........220.........230.........240.........250.........
 
   135.. ..140.....
Predicted Secondary structure 


.



Query SS confidence 


.







Query Sequence  KAG. LKSAKELD
Query Conservation     .
 
  

 
Alig confidence 


.







Template Conservation 

 

 

 


Template Sequence  YMKNVNSIEDLK
Template Known Secondary structure  T
TT

BTGGGT
Template Predicted Secondary structure 







Template SS confidence 











   260.........270.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions