Job Description P45766 Confidence 98.07% Date Thu Jan 5 12:03:41 GMT 2012 Rank 71 Aligned Residues 132 % Identity 17% Template c2zzxD_ PDB info PDB header:transport protein Chain: D: PDB Molecule:abc transporter, solute-binding protein; PDBTitle: crystal structure of a periplasmic substrate binding protein in2 complex with lactate Resolution 1.75 Å

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		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.					.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure																								.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	I	C	R	G	V	A	A	A	V	F	G	D	D	T	K	V	K	Y	T	P	L	.	.	.	.	T	A	K	E	R	F	T	A	L	Q	S	G	E	V	D	L	L	S	R	N	T	T	W	T	S	S	R	D	A	G	M	G	M	A	F	T	G	V	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																								.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.									.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.
Template Sequence		K	F	T	E	R	V	K	E	L	T	D	G	Q	.	L	E	V	Q	P	F	P	A	G	A	V	V	G	T	F	D	M	F	D	A	V	K	T	G	V	L	D	G	M	N	P	F	T	L	Y	W	A	G	R	M	P	V	T	A	F	L	S	S	Y	A	L	G	L	D	R	P	D	Q	W	E	T	W	F	Y	S	L
Template Known Secondary structure											T	T	T	S	.								T	T	S	S	S		G	G	G								T	S	S	S					B	G	G	G	G	T	T	T		G	G	G	G	G	S	S			T	T	S			S										T	S
Template Predicted Secondary structure															.
Template SS confidence
		3054	.	.	.	.	.	3060	.	.	.	.	.	.		.	.	.	3070	.	.	.	.	.	.	.	.	.	3080	.	.	.	.	.	.	.	.	.	3090	.	.	.	.	.	.	.	.	.	3100	.	.	.	.	.	.	.	.	.	3110	.	.	.	.	.	.	.	.	.	3120	.	.	.	.	.	.	.	.	.	3130	.	.
																						124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	Y	D	G	I	G	F	L	T	H	D	K	A	G	L	K	S	A	K	E	L	D	G	A	T	V	C	I	Q	A	G	T	D	T	E	L	N	V	A	D	Y	F	K	A	N	N	M	K	Y	T	P	V	T	F	D	R	S	D	E	S
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.																	.												.	.	.	.	.	.									.
Template Conservation																																	.																	.												.	.	.	.	.	.									.
Template Sequence		G	G	L	D	I	A	R	R	A	F	A	E	Q	G	L	F	Y	V	G	P	V	Q	H	D	L	N	I	I	H	S	K	.	K	P	I	R	R	F	E	D	F	K	G	V	K	L	R	V	.	P	G	G	M	I	A	E	V	F	A	A	.	.	.	.	.	.	A	G	A	S	T	V	L	L	.	P	G	G	E	V
Template Known Secondary structure		S											T	T	T																	S	.	S				S	G	G	G	G	T	T						.		S										.	.	.	.	.	.	T	T							.		G	G	G
Template Predicted Secondary structure																																	.																	.												.	.	.	.	.	.									.
Template SS confidence
		3133	.	.	.	.	.	.	3140	.	.	.	.	.	.	.	.	.	3150	.	.	.	.	.	.	.	.	.	3160	.	.	.		.	.	.	.	.	.	3170	.	.	.	.	.	.	.	.	.		3180	.	.	.	.	.	.	.	.	.	3190							.	.	.	.	.	.	.	.		.	3200	.	.	.
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	A	L	E	S	G	R	C	D	T	L	A	S	D	Q	S	Q	L	Y	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	P	A	L	E	R	G	V	I	D	A	A	D	F	V	G	P	A	V	N	Y
Template Known Secondary structure							T	T	S		S					S
Template Predicted Secondary structure
Template SS confidence
		3204	.	.	.	.	.	3210	.	.	.	.	.	.	.	.	.	3220	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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