Job Description P45766 Confidence 96.78% Date Thu Jan 5 12:03:41 GMT 2012 Rank 90 Aligned Residues 197 % Identity 15% Template c2ypnA_ PDB info PDB header:transferase Chain: A: PDB Molecule:protein (hydroxymethylbilane synthase); PDBTitle: hydroxymethylbilane synthase Resolution 2.30 Å

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		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.			.	.	.	.	.	.	.	80	.	.	.	.	.				.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure																																									.	.														.	.	.
Query SS confidence																																									.	.														.	.	.
Query Sequence		K	G	F	V	Q	C	G	I	S	D	G	L	P	G	F	S	Y	A	D	A	D	G	K	F	S	G	I	D	V	D	I	C	R	G	V	A	A	A	V	.	.	F	G	D	D	T	K	V	K	Y	T	P	L	T	.	.	.	A	K	E	R	F	T	A	L	Q	S	G	E	V	D	L	L	S	R	N	T	T	W	T
Query Conservation																																									.	.														.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.														.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	N	V	L	R	I	A	T	R	Q	S	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	L	W	Q	A	H	Y	V	K	D	K	L	M	A	S	H	P	G	L	V	V	E	L	V	P	M	V	G	L	F	V	K	E	L	E	V	A	L	L	E	N	R	A	D	I	A	V	H	S	M	K	D	V
Template Known Secondary structure												S		.	.	.	.	.	.	.	.	.	.	.	.	.	.																		T	T																						T	T	S		S						G	G	G	S
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.															.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.		.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.		.	180	.	.	.	.	.	.
Predicted Secondary structure																																						.																																			.
Query SS confidence																																						.																																			.
Query Sequence		S	S	R	D	A	G	M	G	M	A	F	T	G	V	T	Y	Y	D	G	I	G	F	L	T	H	D	K	A	G	L	K	S	A	K	E	L	.	D	G	A	T	V	C	I	Q	A	G	T	D	T	E	L	N	V	A	D	Y	F	K	A	N	N	M	K	Y	T	P	V	T	F	D	.	R	S	D	E	S	A	K	A
Query Conservation																																						.																																			.
Alig confidence																														.	.							.										.	.	.	.	.																					.
Template Conservation																														.	.																	.	.	.	.	.
Template Sequence		P	V	E	F	P	Q	G	L	G	L	V	T	I	C	E	R	E	D	P	R	D	A	F	V	S	N	N	Y	.	.	D	S	L	D	A	L	P	A	G	S	I	V	G	T	S	S	.	.	.	.	.	L	R	R	Q	C	Q	L	A	E	R	R	P	D	L	I	I	R	S	L	R	G	N	V	G	T	R	L	S	K
Template Known Secondary structure			S				T	T																			S	S		.	.	S	S	S	T	T			T	T								.	.	.	.	.												T	T	S							S
Template Predicted Secondary structure																														.	.																	.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.			.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.						130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.					.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.					.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure																																										.	.	.	.																		.	.	.	.
Query SS confidence																																										.	.	.	.																		.	.	.	.
Query Sequence		L	E	S	G	R	C	D	T	L	A	S	D	Q	S	Q	L	Y	A	L	R	I	K	L	S	N	P	A	E	W	I	V	L	P	E	V	I	S	K	E	P	.	.	.	.	L	G	P	V	V	R	R	G	D	D	E	W	F	S	I	V	R	.	.	.	.	W	T	L	F	A	M	L	N	A	E
Query Conservation																																										.	.	.	.																		.	.	.	.
Alig confidence																			.	.																						.	.	.	.																		.	.	.	.
Template Conservation																			.	.
Template Sequence		L	D	N	G	E	Y	D	A	I	I	L	A	V	A	G	L	K	.	.	R	L	G	L	E	S	R	I	R	A	A	L	P	P	E	I	S	L	P	A	V	G	Q	G	A	V	G	I	E	C	R	L	D	D	S	R	T	R	E	L	L	A	A	L	N	H	H	E	T	A	L	R	V	T	A	E
Template Known Secondary structure				T	T	S		S											.	.		T	T		G	G	G							T	T	T	S				T	T	T	T								T	T									G	G	G
Template Predicted Secondary structure																			.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.			.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions