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Job DescriptionP45766
Confidence98.26%DateThu Jan 5 12:03:41 GMT 2012
Rank64Aligned Residues140
% Identity13%Templatec2qpqC_
PDB info PDB header:transport proteinChain: C: PDB Molecule:protein bug27; PDBTitle: structure of bug27 from bordetella pertussis
Resolution1.92 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   116...120.........130.........140.... .....150. ........160.........170.........180......
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Query Sequence  GMAFTGVTYYDGIGFLTHDKAGLKSAKEL. . . . . . DGATVCI. . . QAGTDTELNVADYFKANNMKYTPVTFDRSDESAKA
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Template Sequence  DFAAVINVAYVPSVFVVPAGSKYKTLGELMAAAKQTNTQVTYGSCGNGTPQHLAGELLNVSAKTHMVHVPYKGCGPALND
Template Known Secondary structure  STT
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   92.......100.........110.........120.........130.........140.........150.........160.........170.
 
   187..190.........200.........210.........220...... ...230.... .....240.......
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Query Sequence  LESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEP. . . . . . . . . . . . . . . . . . LGPVVRRG. DDEWFSIVRWTLF
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Template Sequence  VLGSQIGLAVVTASSAIPFIKAGKLQALAVTSKERSALLPEVPTVAEQGVAGYELNQWHGLLVPGATPMAVRQKLYDGIA
Template Known Secondary structure  TTSSS
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   172.......180.........190.........200.........210.........220.........230.........240.........250.
 
   248.250.....
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Query Sequence  AMLNAEEM
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Template Sequence  KVMQRDDV
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   252.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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