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Job DescriptionP45766
Confidence94.54%DateThu Jan 5 12:03:41 GMT 2012
Rank109Aligned Residues195
% Identity9%Templatec2hxrA_
PDB info PDB header:transcriptionChain: A: PDB Molecule:hth-type transcriptional regulator cynr; PDBTitle: structure of the ligand binding domain of e. coli cynr, a2 transcriptional regulator controlling cyanate metabolism
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   36...40.........50.........60.........70.........80.........90.........100.........110.....
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Query Sequence  FVQCGISDGLPGFSYADADGKFSGIDVDICRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGM
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Template Sequence  SLRIAVTPTF. . . . . . . . . . . TSYFIGPLXADFYARYP. . SITLQLQEXSQEKIEDXLCRDELDVGIAFAPVHSPELEAI
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TT
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   92.......100. ........110........ .120.........130.........140.........150........
 
   116...120.........130.........140.........150.........160.........170.... .....180.........190....
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Query Sequence  GMAFTGVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTP. VTFDRSDESAKALESGRCDT
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Template Sequence  PLLTESLALVVAQHHPLAVHEQVALSRLHDEKLVLLSAEFATREQIDHYCEKAGLHPQVVIEANSISAVLELIRRTSLST
Template Known Secondary structure  TTSGGGG
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GGGGGG

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   159160.........170.........180.........190.........200.........210.........220.........230........
 
   195....200.........210.........220.........230.... .....240.........
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Query Sequence  LASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRG. . . DDEWFSIVRWTLFAM
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Template Sequence  LLPAAIATQH. . . . . . DGLKAISLAPPLLERTAVLLRRKNSWQTAAAKAFLHXALDKC
Template Known Secondary structure  T
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   239240........ .250.........260.........270.........280.........290
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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