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Job DescriptionP45766
Confidence99.08%DateThu Jan 5 12:03:41 GMT 2012
Rank46Aligned Residues229
% Identity16%Templatec2de4B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:dibenzothiophene desulfurization enzyme b; PDBTitle: crystal structure of dszb c27s mutant in complex with biphenyl-2-2 sulfinic acid
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   57..60.........70.........80...... ...90.........100.........110........ .120.........130..
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Query Sequence  FSGIDVDICRGVAAAVFGDDTKVKYTPLTA. KERFTALQSGEVDLLSRNTTWTSSRDAGMGMA. . . FTGVTYYDGIGFLT
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Template Sequence  PNALLTASESGFLDAAGIE. . . LDVLSGQQGTVHFTYDQPAYTRFG. GEIPPLLSEGLRAPGRTRLLGITPLLGRQGFFV
Template Known Secondary structure 

TTTT...
BGGGTT

STT.
STT
TTS

S
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   30.........40........ .50.........60.........70.. .......80.........90.........100.....
 
   133......140.........150. ........160.........170. ........180.
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Query Sequence  HDKAGLKSAKELDGATVCI. . . . . . . . . . . . . . . . . . . . . . . . . . QAGTDTELNVADYFKANNMK. . . YTPVTFDRSD. .
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Template Sequence  RDDSPITAAADLAGRRIGVSASAIRILRGQLGDYLELDPWRQTLVALGSWEARALLHTLEHGELGVDDVELVPISSPGVD
Template Known Secondary structure 
TT
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SGGGGTT

T

TTGGGS
TTTTT

GGGS


TTTS
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   106...110.........120.........130.........140.........150.........160.........170.........180.....
 
   182.......190.........200.........210.........220.........230........
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . ESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEW
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Template Sequence  VPAEQLEESATVKGADLFPDVARGQAAVLASGDVDALYSWLP. . . . WAGELQATGARPVVDLGLDERNAYASVWTVSSGL
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SSBSSSTTTS
S....TTT
SS
GGGSGGG
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   186...190.........200.........210.........220....... ..230.........240.........250.........260.
 
   239 240.........250.........260.........270.........280.........290.........300.........310....
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Query Sequence  F. . . . SIVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKEGDYGKDLKLDNKWAYNIIKQVGNYSEIFERNVG
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Template Sequence  VRQRPGLVQRLVDAAVDAGLW. . . . . . . . . . . . ARDHSDAVTSL. . . . . HAANLGVSTGAVGQG. . . . . . FGADFQQRLV
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   262.......270.........280.. .......290... ......300........ .310........
 
   315.
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Query Sequence  SE
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Template Sequence  PR
Template Known Secondary structure 
B
Template Predicted Secondary structure 

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   319320
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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