Job Description P45766 Confidence 76.55% Date Thu Jan 5 12:03:41 GMT 2012 Rank 143 Aligned Residues 147 % Identity 14% Template c1lfgA_ PDB info PDB header:transferrin Chain: A: PDB Molecule:lactoferrin; PDBTitle: molecular replacement solution of the structure of apolactoferrin, a2 protein displaying large-scale conformational change Resolution 2.20 Å

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		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.																			.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	T	P	L	T	A	K	E	R	F	T	A	L	Q	S	G	E	V	D	L	L	S	R	N	T	T	W	T	S	S	R	D	A	G	M	G	M	A	F	T	G	V	T	Y	Y	D	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	G	F	L	T	H	D	K	A	G	L	K	S	A	K
Query Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	S	A	S	T	T	E	D	C	I	A	L	V	L	K	G	E	A	D	A	M	S	L	D	G	G	Y	V	Y	T	A	G	K	C	G	L	V	P	V	L	A	E	N	Y	K	S	A	Q	S	S	D	P	D	P	N	C	V	D	R	P	V	E	G	Y	L	A	V	A	V	V	R	R	S	D	T	S	L	T	W	N
Template Known Secondary structure					S	S										T	T	S			B														T	T												S	S			S	S		T	T	G	G	G	S													T	T		T	T			G	G
Template Predicted Secondary structure
Template SS confidence
		372	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.
		143	.	.	.	.	.	.	150	.			.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180																																						.	.	.
Predicted Secondary structure											.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	L	D	G	A	T	V	C	I	.	.	Q	A	G	T	D	T	E	L	N	V	A	D	Y	F	K	A	N	N	M	K	Y	T	P	V	T	F	D	R	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	E	S
Query Conservation											.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	V	K	G	K	K	S	C	H	T	A	V	D	R	T	A	G	W	N	I	P	M	G	L	L	F	N	Q	T	G	S	C	K	F	D	E	Y	F	S	Q	S	C	A	P	G	S	D	P	A	S	N	L	C	A	L	C	I	G	D	E	E	G	E	N	K	C	V	P	N	S	N	E	R	Y	Y	G	Y	T	G	A
Template Known Secondary structure		G		T	T	S					S		T	T		T	T	T	T																G	G	G	S	S	S					T	T	S		T	T	S	G	G	G	T	T				S	T	T	S		S	T	T		S	S	T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		452	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.									.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.
Query Sequence		A	K	A	L	E	S	G	R	C	D	T	L	A	S	D	Q	S	Q	L	Y	A	L	.	.	.	.	.	.	.	.	R	I	K	L	S	N	P	A	E	W	I	V	L	P	E	V	I	S	K	E	P	L
Query Conservation																								.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	R	C	L	A	E	N	A	G	D	V	A	F	V	K	D	V	T	V	L	Q	N	T	D	G	N	N	N	E	A	W	A	K	D	L	K	L	A	D	F	A	L	L	C	L	D	G	K	R	K	P	V
Template Known Secondary structure							T	T	S		S						T						T	S	S	S	S			S	T	T	T	T	T			G	G	G						T	T	S					G
Template Predicted Secondary structure
Template SS confidence
		532	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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