Job Description P39835 Confidence 5.12% Date Thu Jan 5 12:01:03 GMT 2012 Rank 4 Aligned Residues 199 % Identity 11% Template d2a65a1 SCOP info SNF-like SNF-like SNF-like Resolution 1.65

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		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	D	C	G	G	A	Q	R	I	A	T	T	L	I	A	K	F	G	K	K	H	I	Q	W	A	V	V	L	T	G	F	T	V	G	F	A	L	F	Y	E	V	G	F	V	L	M	L	P	L	V	F	T	I	A	A	S	A	N	I	P	L	L	Y	V	G	V	P	M	A	A	A	L	S	V	T	H	G	F	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	A	K	A	G	A	F	N	L	G	F	I	T	L	P	A	I	F	S	Q	T	A	G	G	T	F	L	G	F	L	W	F	F	L	L	F	F	A	G	L	T	S	S	I	A	I	M	Q	P	M	I	A	F	L	E	D	E	L	K	L	S	R	K	H	A	V	L	W	T	A	A	I	V	F	F	S	A	H	L	V
Template Known Secondary structure							S	S					T							T	T	S	T	T																																		T	S
Template Predicted Secondary structure
Template SS confidence
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	P	H	P	G	P	T	A	I	A	T	I	F	N	A	D	M	G	K	T	L	L	Y	G	T	I	L	A	I	P	T	V	I	L	A	G	P	V	Y	A	R	V	L	K	G	I	D	K	P	I	P	E	G	L	Y	S	A	K	T	F	S	E	E	E	M	P	S	F	G	V	S	V	W	T	S	L	V	P	V	V
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	F	L	N	K	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	D	E	M	D	F	W	A	G	T	I	G	V	V	F	F	G	L	T	E	L	I	I	F	F	W	I	F	G	A	D	K	A	W	E	E	I	N	R	G	G	I	I	K	V	P	R	I	Y	Y	Y	V	M	R	Y	I	T	P	A	F
Template Known Secondary structure				B	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	T	T																T	T	S											T	T		S	S				T								T
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		394	.	.	.	.	.															400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	M	A	M	R	A	I	A	E	M	I	L	P	K	G	H	A	F	L	P	V	A	E	F	L	G	D	P	V	M	A	T	L	I	A	V	L	I	A	M	F	T	F	G	L	N	R	G	R	S	M	D	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	V	L	L	V	V	W	A	R	E	Y	I	P	K	I	M	E	E	T	H	W	T	V	W	I	T	R	F	Y	I	I	G	L	F	L	F	L	T	F	L	V	F	L	A	E	R	R	R	N	H	E	S
Template Known Secondary structure													T							S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions