Job Description P0A6Q3 Confidence 89.49% Date Thu Jan 5 11:03:41 GMT 2012 Rank 47 Aligned Residues 107 % Identity 14% Template c3lwgB_ PDB info PDB header:unknown function Chain: B: PDB Molecule:hp0420 homologue; PDBTitle: crystal structure of hp0420-homologue c46a from helicobacter2 felis Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	V	K	M	T	E	T	G	G	N	F	D	K	G	Y	V	E	A	E	L	D	I	N	P	D	L	W	F	F	G	C	H	F	I	G	D	P	V	M	P	G	C	L	G	L	D	A	M	W	Q	L	V	G	F	Y	L	G	W	L	G	G	E	G	K	G	R	A	L	G	V	G	E	V	K	F	T	G	Q	V
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.	.															.	.	.	.																							.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.															.	.	.	.																							.	.	.	.	.
Template Sequence		E	L	I	S	F	G	S	G	.	.	.	.	.	.	.	.	.	K	A	T	V	C	L	T	P	K	E	F	M	L	A	.	.	.	.	E	D	D	V	V	H	A	G	F	I	V	G	A	A	S	F	A	A	L	C	A	L	.	.	.	.	.	N	K	K	N	S	L	I	S	S	M	K	V	N	L	L	A	P	I
Template Known Secondary structure								T	T	.	.	.	.	.	.	.	.	.										G	G	G			.	.	.	.		T	T																				.	.	.	.	.			T	T												S
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.															.	.	.	.																							.	.	.	.	.
Template SS confidence
		25	.	.	.	.	30	.	.										.	.	.	.	.	.	.	40	.	.	.	.	.	.					.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.						.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	T	A	K	K	V	T	Y	R	I	H	F	K	R	I	V	N	R	R	L	I	M	G	L	A	D	G	E	V	L	V	D	G	R	L	I	Y	T	A	S	D	L	K	V	G	L	F	Q	D
Query Conservation
Alig confidence						.															.	.	.																				.
Template Conservation						.															.	.	.																				.
Template Sequence		E	I	K	Q	.	E	I	Y	F	N	A	T	I	T	H	T	S	S	K	.	.	.	K	S	T	I	R	V	E	G	E	F	M	E	I	K	V	F	E	G	D	.	F	E	I	L	V	F	E	K
Template Known Secondary structure			T	T		.													S	S	.	.	.											T	T								.							S	S
Template Predicted Secondary structure						.															.	.	.																				.
Template SS confidence
		87	.	.	90		.	.	.	.	.	.	.	.	.	100	.	.	.	.				.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.		.	.	.	.	.	.	130	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions