Job Description P71298 Confidence 99.85% Date Thu Jan 5 12:12:44 GMT 2012 Rank 12 Aligned Residues 183 % Identity 15% Template d1f44a2 SCOP info DNA breaking-rejoining enzymes DNA breaking-rejoining enzymes Lambda integrase-like, catalytic core Resolution 2.05

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		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.				.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
Predicted Secondary structure																														.	.	.
Query SS confidence																														.	.	.
Query Sequence		A	S	K	A	D	D	C	L	Q	K	E	Q	L	K	S	W	F	S	A	V	R	S	L	N	N	P	I	A	.	.	.	S	A	Y	L	Q	V	L	L	L	T	G	A	R	R	E	E	I	A	S	L	R	W	S	D	V	D	F	K	W	S	S	M	R	I	K	D	K	I	E	G	E	R	I	I	P	L	T	P	Y
Query Conservation																														.	.	.
Alig confidence																														.	.	.
Template Conservation
Template Sequence		R	A	K	Q	A	L	A	F	E	R	T	D	F	D	Q	V	R	S	L	M	E	N	S	D	R	C	Q	D	I	R	N	L	A	F	L	G	I	A	Y	N	T	L	L	R	I	A	E	I	A	R	I	R	V	K	D	I	S	R	T	D	G	G	R	M	L	I	H	I	G	R	G	V	E	K	A	L	S	L	G	V
Template Known Secondary structure																						T	T																														B	G	G	G					G	G	G
Template Predicted Secondary structure
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360										.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.										.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.
Query Sequence		V	S	E	L	L	N	V	L	A	Q	S	P	N	S	D	V	N	K	.	.	.	.	.	.	.	.	.	E	G	W	V	F	R	S	N	S	K	S	G	K	I	I	E	P	R	S	A	H	N	R	A	L	V	L	A	.	.	.	.	.	.	.	.	.	E	L	P	H	I	S	L	H	G	L	R	R	S	F	G	T
Query Conservation																				.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	K	L	V	E	R	W	I	S	V	S	G	V	A	D	D	P	N	N	Y	L	F	C	R	V	R	K	N	G	V	A	A	P	S	A	T	S	Q	L	S	T	R	A	L	E	G	I	F	E	A	T	H	R	L	I	Y	G	A	K	D	D	S	G	Q	R	Y	L	A	W	S	G	H	S	A	R	V	G	A	A	R
Template Known Secondary structure														G	G	G	S	T	T	S	B	S	S			B		T	T	S		B				S	S																						S			T	T			T	T	S	S			T	T
Template Predicted Secondary structure
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
		405	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	E	W	V	E	V	P	T	G	I	V	A	Q	I	M	G	H	K	P	S	A	L	A	E	K	H	Y	R	R	R	P	L	D	L	L	R	K	W	H	E	K	I	E	T
Query Conservation
Alig confidence																										.
Template Conservation																										.
Template Sequence		D	M	A	R	A	G	V	S	I	P	E	I	M	Q	A	G	G	W	T	N	V	N	I	V	.	M	N	F	I	R	N	L	D	S	E	T	G	A	M	V	R	L	L	E	D
Template Known Secondary structure						T	T											T								.				T	T	T			S										T	T
Template Predicted Secondary structure																										.
Template SS confidence
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.		.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions