Job Description P71298 Confidence 47.37% Date Thu Jan 5 12:12:44 GMT 2012 Rank 36 Aligned Residues 109 % Identity 18% Template d1a41a_ SCOP info DNA breaking-rejoining enzymes DNA breaking-rejoining enzymes Eukaryotic DNA topoisomerase I, catalytic core Resolution 2.30

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		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.			.	330	.	.	.	.	.	.	.	.	.			340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
Predicted Secondary structure																					.	.												.	.
Query SS confidence																					.	.												.	.
Query Sequence		I	A	S	L	R	W	S	D	V	D	F	K	W	S	S	M	R	I	K	.	.	D	K	I	E	G	E	R	I	I	P	L	.	.	T	P	Y	V	S	E	L	L	N	V	L	A	Q	S	P	N	S	D	V	N	K	E	G	W	V	F	R	S	N	S	K	S	G	K	I	I	E	P	R	S	A	H	N	R	A	L
Query Conservation																					.	.												.	.
Alig confidence																					.	.												.	.												.	.	.	.												.	.	.	.	.	.	.
Template Conservation																																															.	.	.	.												.	.	.	.	.	.	.
Template Sequence		L	L	T	L	K	N	K	H	I	E	I	S	P	D	E	I	V	I	K	F	V	G	K	D	K	V	S	H	E	F	V	V	H	K	S	N	R	L	Y	K	P	L	L	K	L	.	.	.	.	T	D	D	S	S	P	E	E	F	L	F	.	.	.	.	.	.	.	N	K	L	S	E	R	K	V	Y	E	C	I	K
Template Known Secondary structure				T		B	G	G	G					T	T									T	T	T									T	T	S	S	S								.	.	.	.			T	T		T	T	S	B	S	S	.	.	.	.	.	.	.	T	T
Template Predicted Secondary structure																																															.	.	.	.												.	.	.	.	.	.	.
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.					190	.	.	.	.	.	.	.	.	.	200								.	.	.	.	.	.	.	.	.	210	.	.	.
		386	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.																				.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	L	A	E	L	P	H	I	S	L	H	G	L	R	R	S	F	G	T	L	A	E	W	V	E	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	T	G	I	V	A	Q	I	M	G	H	K	P	S	A	L	A	E	K	H	Y	R	R
Query Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template Conservation				.	.	.	.																																																						.
Template Sequence		Q	F	.	.	.	.	G	I	R	I	K	D	L	R	T	Y	G	V	N	Y	T	F	L	Y	N	F	W	T	N	V	K	S	I	S	P	L	P	S	P	K	K	L	I	A	L	T	I	K	Q	T	A	E	V	V	G	H	T	P	S	.	I	S	K	R	A	Y	M	A
Template Known Secondary structure			T	.	.	.	.	T																										S	S	S																				S	S				.
Template Predicted Secondary structure				.	.	.	.																																																						.
Template SS confidence
		214	.					.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.		.	270	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions