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Job DescriptionP71298
Confidence97.19%DateThu Jan 5 12:12:44 GMT 2012
Rank29Aligned Residues144
% Identity16%Templatec2v6eB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:protelemorase; PDBTitle: protelomerase telk complexed with substrate dna
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   288.290.........300.........310... ......320.........330... ......340.........350.........360.
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Query Sequence  LNNPIASAYLQVLLLTGARREEIASL. RWSDVDFKWSSMRIKDKIEG. . . . . ERIIPLTPYVSELLNVLAQSPNSDVNKE
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Template Sequence  TRRGMAPLAFALAALSGRRMIEIMLQGEFSVAGKYTVTFLGQAKKRSEDKGISRKIYTLCDATLFVSLVNELRSCPAAAD
Template Known Secondary structure  STGGG


TT

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   257..260.........270.........280.........290.........300.........310.........320.........330......
 
   362 .......370.........380........ .390.........400........ .410.... .....420
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Query Sequence  G. . . . . . WVFRSNSKSGKIIEPRSAHNRALVLA. . . . . ELPHISLHGLRRSFGTLAEW. . . . . . . . . VEVPTG. IVAQIM
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Template Sequence  FDEVIKGYG. . ENDTRSENGRINAILATAFNPWVKTFLGDDRRVYKDSRAIYARIAYEMFFRVDPRWKNVDEDVFFMEIL
Template Known Secondary structure  TT
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   337..340..... ....350.........360.........370.........380.........390.........400.........410....
 
   421........430....
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Query Sequence  GHKPSALAEKHYRR
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Template Sequence  GHDDEN. TQLHYKQ
Template Known Secondary structure  T
SSTT.GGGSS

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   415....420 .......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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