Job Description P71298 Confidence 98.89% Date Thu Jan 5 12:12:44 GMT 2012 Rank 23 Aligned Residues 113 % Identity 12% Template c2kd1A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:dna integration/recombination/invertion protein; PDBTitle: solution nmr structure of the integrase-like domain from2 bacillus cereus ordered locus bc_1272. northeast3 structural genomics consortium target bcr268f Resolution UNK

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		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	K	T	K	V	T	F	S	V	A	W	E	D	Y	L	Q	E	L	R	T	G	I	S	A	K	T	K	R	P	Y	S	T	R	Y	I	A	D	H	I	N	L	S	S	R	G	G	E	S	K	K	R	G	Q	G	P	T	S	A	G	P	L	A	S	L	L	N	L	P	L	S	E	L	T	P	D	Y	I	A	A	W
Query Conservation
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	P	S	K	L	S	Y	G	E	Y	L	E	S	W	F	N	T	K	R	H	S	V	G	I	Q	T	A	K	V	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	G	Y	L	N	S	R	I	I	P	S	L	G	N	I	K	L	A	K	L	T	S	L	H	M	Q	N	Y
Template Known Secondary structure				S		S	B																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T	T					T	T	S	S	B	G	G	G
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.																							.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.
		213	.	.			.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure					.	.
Query SS confidence					.	.
Query Sequence		L	S	T	.	.	E	R	Q	N	R	P	T	V	T	A	H	A	Y	R	L	L	R	A	F	I	K	W	S	N	Y	Q	K	K	Y	Q	G	I	I	P	G	D	L	A	Q	D	Y	N	V	R	K	M	V	P	V	S	A	S
Query Conservation					.	.
Alig confidence					.	.
Template Conservation
Template Sequence		V	N	S	L	R	D	E	G	L	K	R	G	T	I	E	K	I	I	K	V	I	R	N	S	L	E	H	A	I	D	L	E	L	I	T	K	N	V	A	A	K	T	K	L	P	K	A	D	K	E	E	L	E	H	H	H	H
Template Known Secondary structure									T																							T	T	S		S	S		T	T	T	T					S					S	S	S
Template Predicted Secondary structure
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions